Detailed information of OS493_019104-T1 in Lophelia pertusa

Genomic Location: scaffold_65:438739...445246
NR annotation: KAJ7360016.1, hypothetical protein OS493_019104 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
Q7Z407CUB and sushi domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CSMD3 PE=1 SV=3
Q7Z408CUB and sushi domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CSMD2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02494HYRHYR domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003410DomainHYR domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR043555FamilySushi repeat-containing protein SRPX-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46343HYR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

Expression pattern
 Expression trend for OS493_019104-T1 global co-expression network
TOP