Detailed information of OS493_019272-T1 in Lophelia pertusa

Genomic Location: scaffold_66:1604520...1604876
NR annotation: KAJ7331679.1, hypothetical protein OS493_019272 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B0W730Nonsense-mediated mRNA decay factor SMG8 OS=Culex quinquefasciatus OX=7176 GN=CPIJ003128 PE=3 SV=1
B4HWV2Nonsense-mediated mRNA decay factor SMG8 OS=Drosophila sechellia OX=7238 GN=GM11479 PE=3 SV=1
B4Q9T2Nonsense-mediated mRNA decay factor SMG8 OS=Drosophila simulans OX=7240 GN=GD22229 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10220Smg8_Smg9Smg8_Smg9 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019354FamilyNonsense-mediated mRNA decay factor SMG8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13091AMPLIFIED IN BREAST CANCER 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Expression pattern
 Expression trend for OS493_019272-T1 global co-expression network
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