Detailed information of OS493_019279-T1 in Lophelia pertusa

Genomic Location: scaffold_66:1665910...1667161
NR annotation: KAJ7331685.1, hypothetical protein OS493_019279 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8ND04Nonsense-mediated mRNA decay factor SMG8 OS=Homo sapiens OX=9606 GN=SMG8 PE=1 SV=1
Q8VE18Nonsense-mediated mRNA decay factor SMG8 OS=Mus musculus OX=10090 GN=Smg8 PE=1 SV=1
A1A4J7Nonsense-mediated mRNA decay factor SMG8 OS=Bos taurus OX=9913 GN=SMG8 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10220Smg8_Smg9Smg8_Smg9 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019354FamilyNonsense-mediated mRNA decay factor SMG8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13091AMPLIFIED IN BREAST CANCER 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Expression pattern
 Expression trend for OS493_019279-T1 global co-expression network
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