Detailed information of OS493_020019-T1 in Lophelia pertusa

Genomic Location: scaffold_72:558148...592823
NR annotation: KAJ7331237.1, hypothetical protein OS493_020019 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0DXS3Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2
Q9LQV2RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1
Q7XM31Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05183RdRPRNA dependent RNA polymeraseFamilyInterproscan
PF01909NTP_transf_2Nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR007855FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan
IPR002934DomainPolymerase, nucleotidyl transferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23079RNA-DEPENDENT RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003968Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031380Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan

Expression pattern
 Expression trend for OS493_020019-T1 global co-expression network
TOP