Detailed information of OS493_020020-T1 in Lophelia pertusa

Genomic Location: scaffold_72:592865...604052
NR annotation: KAJ7331238.1, hypothetical protein OS493_020020 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1D9Z6Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dcl2 PE=3 SV=1
Q0CEI2Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dcl2 PE=3 SV=2
Q7S8J7Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dcl-1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF05183RdRPRNA dependent RNA polymeraseFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR007855FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003968Molecular FunctionRNA-dependent RNA polymerase activityInterproscan

Expression pattern
 Expression trend for OS493_020020-T1 global co-expression network
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