Detailed information of OS493_020371-T1 in Lophelia pertusa

Genomic Location: scaffold_74:1653866...1655051
NR annotation: KAJ7384779.1, silencing defective protein Sde2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7T293Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2
Q8K1J5Splicing regulator SDE2 OS=Mus musculus OX=10090 GN=Sde2 PE=1 SV=1
Q6NRI5Splicing regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan

Expression pattern
 Expression trend for OS493_020371-T1 global co-expression network
TOP