Gene detail

Detailed information of OS493_021455-T1 in Lophelia pertusa

Genomic Location: scaffold_82:1075821...1092147
NR annotation: KAJ7372027.1, Breast cancer 2, early onset [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P51587	Breast cancer type 2 susceptibility protein OS=Homo sapiens OX=9606 GN=BRCA2 PE=1 SV=4
P97929	Breast cancer type 2 susceptibility protein homolog OS=Mus musculus OX=10090 GN=Brca2 PE=1 SV=2
O35923	Breast cancer type 2 susceptibility protein homolog OS=Rattus norvegicus OX=10116 GN=Brca2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09103	BRCA-2_OB1	BRCA2, oligonucleotide/oligosaccharide-binding, domain 1	Domain	Interproscan
PF21318	BRCA2DBD_OB2	BRCA2, OB2	Domain	Interproscan
PF09121	Tower	Tower	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR015187	Domain	BRCA2, OB1	Interproscan
IPR015205	Domain	Tower domain	Interproscan
IPR015525	Family	Breast cancer type 2 susceptibility protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11289	BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

Expression pattern