Detailed information of OS493_021723-T1 in Lophelia pertusa

Genomic Location: scaffold_84:1273188...1298495
NR annotation: KAJ7330791.1, hypothetical protein OS493_021723 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR014010DomainREJ domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

Expression pattern
 Expression trend for OS493_021723-T1 global co-expression network
TOP