Gene detail

Detailed information of OS493_021981-T1 in Lophelia pertusa

Genomic Location: scaffold_87:1291115...1296345
NR annotation: KAJ7378677.1, Transcription activator BRG1 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A7Z019	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 OS=Bos taurus OX=9913 GN=SMARCA4 PE=2 SV=1
P51532	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 OS=Homo sapiens OX=9606 GN=SMARCA4 PE=1 SV=2
Q3TKT4	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07529	HSA	HSA domain	Family	Interproscan
PF08880	QLQ	QLQ	Domain	Interproscan
PF07533	BRK	BRK domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014012	Domain	Helicase/SANT-associated domain	Interproscan
IPR014978	Domain	Glutamine-Leucine-Glutamine, QLQ	Interproscan
IPR006576	Domain	BRK domain	Interproscan
IPR037259	Homologous_superfamily	BRK domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10799	SNF2/RAD54 HELICASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

Expression pattern