Detailed information of OS493_022961-T1 in Lophelia pertusa

Genomic Location: scaffold_99:188525...199041
NR annotation: KAJ7378427.1, telomere maintenance via base-excision repair [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0MTA1DNA repair nuclease APEX1 OS=Danio rerio OX=7955 GN=apex1 PE=1 SV=1
P43138DNA repair nuclease/redox regulator APEX1 OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2
P28352DNA repair nuclease/redox regulator APEX1 OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020847Binding_siteAP endonuclease 1, binding siteInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR004808FamilyAP endonuclease 1Interproscan
IPR020848Conserved_siteAP endonuclease 1, conserved siteInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22748AP ENDONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0008311Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan

Expression pattern
 Expression trend for OS493_022961-T1 global co-expression network
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