Detailed information of OS493_023160-T1 in Lophelia pertusa

Genomic Location: scaffold_100:1046898...1059119
NR annotation: KAJ7371819.1, hypothetical protein OS493_023160 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P51610Host cell factor 1 OS=Homo sapiens OX=9606 GN=HCFC1 PE=1 SV=2
D3ZN95Host cell factor 1 OS=Rattus norvegicus OX=10116 GN=Hcfc1 PE=1 SV=1
Q61191Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13418Kelch_4Galactose oxidase, central domainRepeatInterproscan
PF13854Kelch_5Kelch motifRepeatInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043536FamilyHost cell factorInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46003HOST CELL FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0035097Cellular Componenthistone methyltransferase complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14966HCFC1; host cell factor 1-Mitochondrial biogenesisko03029deepkoala

Expression pattern
 Expression trend for OS493_023160-T1 global co-expression network
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