Detailed information of OS493_023847-T1 in Lophelia pertusa

Genomic Location: scaffold_107:1062741...1080657
NR annotation: KAJ7357711.1, hypothetical protein OS493_023847 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q66HC7Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1
Q5R724Transcription factor SPT20 homolog OS=Pongo abelii OX=9601 GN=SUPT20H PE=2 SV=1
Q7TT00Transcription factor SPT20 homolog OS=Mus musculus OX=10090 GN=Supt20h PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12090Spt20_SEPSpt20, SEP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021950FamilyTranscription factor Spt20Interproscan
IPR046468DomainSpt20-like, SEP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13526TRANSCRIPTION FACTOR SPT20 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21245SUPT20H; transcription factor SPT20 homolog-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_023847-T1 global co-expression network
TOP