Detailed information of OS493_024248-T1 in Lophelia pertusa

Genomic Location: scaffold_112:217966...260967
NR annotation: KAJ7371573.1, Hemicentin-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000082DomainSEA domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46013VASCULAR CELL ADHESION MOLECULE 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_024248-T1 global co-expression network
TOP