Gene detail

Detailed information of OS493_025890-T1 in Lophelia pertusa

Genomic Location: scaffold_130:750735...753511
NR annotation: KAJ7371424.1, hypothetical protein OS493_025890 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q69FH1	C-type lectin domain family 4 member D OS=Rattus norvegicus OX=10116 GN=Clec4d PE=1 SV=1
P22897	Macrophage mannose receptor 1 OS=Homo sapiens OX=9606 GN=MRC1 PE=1 SV=1
Q9Z2H6	C-type lectin domain family 4 member D OS=Mus musculus OX=10090 GN=Clec4d PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF00188	CAP	Cysteine-rich secretory protein family	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR035940	Homologous_superfamily	CAP superfamily	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR014044	Domain	CAP domain	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan

Expression pattern