Detailed information of OS493_026205-T1 in Lophelia pertusa

Genomic Location: scaffold_133:1075893...1100467
NR annotation: KAJ7390329.1, LIM and calponin y homology domain protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BVU0DISP complex protein LRCH3 OS=Mus musculus OX=10090 GN=Lrch3 PE=1 SV=3
P62046Leucine-rich repeat and calponin homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lrch1 PE=1 SV=2
Q9Y2L9Leucine-rich repeat and calponin homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LRCH1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_026205-T1 global co-expression network
TOP