Detailed information of OS493_027361-T1 in Lophelia pertusa

Genomic Location: scaffold_148:587819...609409
NR annotation: KAJ7371247.1, E3 ubiquitin-protein ligase herc2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
Q9BVR0Putative HERC2-like protein 3 OS=Homo sapiens OX=9606 GN=HERC2P3 PE=5 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR010606DomainMib-herc2Interproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

Expression pattern
 Expression trend for OS493_027361-T1 global co-expression network
TOP