Gene detail

Detailed information of OS493_027368-T1 in Lophelia pertusa

Genomic Location: scaffold_148:674772...677000
NR annotation: KAJ7371254.1, hypothetical protein OS493_027368 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P47970	Neuronal pentraxin-2 OS=Cavia porcellus OX=10141 GN=NPTX2 PE=1 SV=1
O70340	Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
P47972	Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00354	Pentaxin	Pentaxin family	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001759	Family	Pentraxin-related	Interproscan
IPR051360	Family	Neuronal Pentraxin and Related	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19277	PENTRAXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

Expression pattern