Gene detail

Detailed information of OS493_029399-T1 in Lophelia pertusa

Genomic Location: scaffold_178:636614...639573
NR annotation: KAJ7370855.1, biological adhesion [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
E1BMV3	Matrilin-1 OS=Bos taurus OX=9913 GN=MATN1 PE=1 SV=4
O42401	Matrilin-3 OS=Gallus gallus OX=9031 GN=MATN3 PE=2 SV=1
P15989	Collagen alpha-3(VI) chain OS=Gallus gallus OX=9031 GN=COL6A3 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

Expression pattern