Detailed information of OS493_030670-T1 in Lophelia pertusa

Genomic Location: scaffold_201:8185...12656
NR annotation: KAJ7377076.1, Serine--tRNA ligase, cytoplasmic [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49591Serine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=SARS1 PE=1 SV=3
Q5R9K9Serine--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=SARS1 PE=2 SV=3
P13642Serine--tRNA ligase, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=SARS1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11778SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan

Expression pattern
 Expression trend for OS493_030670-T1 global co-expression network
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