Gene detail

Detailed information of OS493_030862-T1 in Lophelia pertusa

Genomic Location: scaffold_204:163425...168167
NR annotation: KAJ7323740.1, Transportin-1 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q3SYU7	Transportin-1 OS=Bos taurus OX=9913 GN=TNPO1 PE=1 SV=2
Q92973	Transportin-1 OS=Homo sapiens OX=9606 GN=TNPO1 PE=1 SV=2
Q8BFY9	Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13513	HEAT_EZ	HEAT-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040122	Family	Importin beta family	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10527	IMPORTIN BETA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0061608	Molecular Function	nuclear import signal receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18727	TNPO2, IPO3, KPNB2B; transportin-2	-	Messenger RNA biogenesis	ko03019	deepkoala

Expression pattern