Gene detail

Detailed information of OS493_031813-T1 in Lophelia pertusa

Genomic Location: scaffold_226:411420...418959
NR annotation: KAJ7370528.1, hypothetical protein OS493_031813 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q99715	Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12A1 PE=1 SV=2
A2AX52	Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
Q60847	Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan

Expression pattern