Detailed information of OS493_031818-T1 in Lophelia pertusa

Genomic Location: scaffold_226:490117...498479
NR annotation: KAJ7370533.1, hypothetical protein OS493_031818 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95460Matrilin-4 OS=Homo sapiens OX=9606 GN=MATN4 PE=1 SV=3
O00339Matrilin-2 OS=Homo sapiens OX=9606 GN=MATN2 PE=1 SV=4
O08746Matrilin-2 OS=Mus musculus OX=10090 GN=Matn2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_031818-T1 global co-expression network
TOP