Detailed information of OS493_034399-T1 in Lophelia pertusa

Genomic Location: scaffold_289:331932...342296
NR annotation: KAJ7389006.1, neurogenic locus notch protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21783Neurogenic locus notch homolog protein 1 OS=Xenopus laevis OX=8355 GN=notch1 PE=1 SV=3
G3I6Z6Neurogenic locus notch homolog protein 1 OS=Cricetulus griseus OX=10029 GN=NOTCH1 PE=1 SV=2
Q07008Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus OX=10116 GN=Notch1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06816NODNOTCH proteinFamilyInterproscan
PF00066NotchLNR domainDomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07684NODPNOTCH proteinFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010660DomainNotch, NOD domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000800DomainNotch domainInterproscan
IPR011656DomainNotch, NODP domainInterproscan
IPR035993Homologous_superfamilyNotch-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24203ANKYRIN REPEAT FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan

Expression pattern
 Expression trend for OS493_034399-T1 global co-expression network
TOP