Gene detail

Detailed information of OS493_034900-T1 in Lophelia pertusa

Genomic Location: scaffold_303:134875...140243
NR annotation: KAJ7376379.1, hypothetical protein OS493_034900 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q2UUI3	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=ccr4 PE=3 SV=1
Q1EA11	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Coccidioides immitis (strain RS) OX=246410 GN=CCR4 PE=3 SV=2
A1CW67	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=ccr4 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR050410	Family	CCR4/nocturin mRNA turnover and transcription	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12121	CARBON CATABOLITE REPRESSOR PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan

Expression pattern