Detailed information of OS493_034982-T1 in Lophelia pertusa

Genomic Location: scaffold_306:100134...117651
NR annotation: KAJ7321409.1, hypothetical protein OS493_034982 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90508Vitellogenin-1 OS=Fundulus heteroclitus OX=8078 GN=vtg1 PE=1 SV=2
Q98893Vitellogenin-2 OS=Fundulus heteroclitus OX=8078 PE=1 SV=1
P04114Apolipoprotein B-100 OS=Homo sapiens OX=9606 GN=APOB PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan

Expression pattern
 Expression trend for OS493_034982-T1 global co-expression network
TOP