Detailed information of OS493_035862-T1 in Lophelia pertusa

Genomic Location: scaffold_337:176652...213017
NR annotation: KAJ7388752.1, Cartilage intermediate layer protein [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

Expression pattern
 Expression trend for OS493_035862-T1 global co-expression network
TOP