Gene detail

Detailed information of OS493_036239-T1 in Lophelia pertusa

Genomic Location: scaffold_355:185059...199128
NR annotation: KAJ7388690.1, hypothetical protein OS493_036239 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P20063	Low-density lipoprotein receptor (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=LDLR PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12662	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF14670	FXa_inhibition	Coagulation Factor Xa inhibitory site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026823	Domain	Complement Clr-like EGF domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24039	FIBRILLIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

Expression pattern