Gene detail

Detailed information of OS493_036941-T1 in Lophelia pertusa

Genomic Location: scaffold_392:8716...18939
NR annotation: KAJ7382103.1, RING-type E3 ubiquitin-protein ligase ppil2, partial [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q13356	RING-type E3 ubiquitin-protein ligase PPIL2 OS=Homo sapiens OX=9606 GN=PPIL2 PE=1 SV=1
Q9D787	RING-type E3 ubiquitin-protein ligase PPIL2 OS=Mus musculus OX=10090 GN=Ppil2 PE=1 SV=2
P52012	Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans OX=6239 GN=cyn-4 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00160	Pro_isomerase	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029000	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR002130	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR044666	Family	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45625	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000413	Biological Process	protein peptidyl-prolyl isomerization	Interproscan
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan

Expression pattern

Expression trend for OS493_036941-T1 global co-expression network