Gene detail

Detailed information of OS493_037209-T1 in Lophelia pertusa

Genomic Location: scaffold_407:166534...170537
NR annotation: KAJ7351027.1, hypothetical protein OS493_037209 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
G3MZY8	DNA-directed RNA polymerase II subunit RPB1 OS=Bos taurus OX=9913 GN=POLR2A PE=1 SV=2
P11414	DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2
P24928	DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05001	RNA_pol_Rpb1_R	RNA polymerase Rpb1 C-terminal repeat	Repeat	Interproscan
PF04998	RNA_pol_Rpb1_5	RNA polymerase Rpb1, domain 5	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000684	Repeat	RNA polymerase II, heptapeptide repeat, eukaryotic	Interproscan
IPR045867	Family	DNA-directed RNA polymerase, subunit beta-prime	Interproscan
IPR007081	Domain	RNA polymerase Rpb1, domain 5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19376	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0001055	Molecular Function	RNA polymerase II activity	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0005665	Cellular Component	RNA polymerase II, core complex	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan

Expression pattern