Detailed information of OS493_037210-T1 in Lophelia pertusa

Genomic Location: scaffold_407:170581...172703
NR annotation: KAJ7351028.1, DNA-directed RNA polymerase II subunit RPB1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G3MZY8DNA-directed RNA polymerase II subunit RPB1 OS=Bos taurus OX=9913 GN=POLR2A PE=1 SV=2
P11414DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2
P24928DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF04990RNA_pol_Rpb1_7RNA polymerase Rpb1, domain 7DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038593Homologous_superfamilyRNA polymerase Rpb1, domain 7 superfamilyInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR007073DomainRNA polymerase Rpb1, domain 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan

Expression pattern
 Expression trend for OS493_037210-T1 global co-expression network
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