Detailed information of OS493_037259-T1 in Lophelia pertusa

Genomic Location: scaffold_412:122261...136597
NR annotation: KAJ7369672.1, hypothetical protein OS493_037259 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32S24Collagen alpha-2(XI) chain OS=Bos taurus OX=9913 GN=COL11A2 PE=3 SV=1
P13942Collagen alpha-2(XI) chain OS=Homo sapiens OX=9606 GN=COL11A2 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR050632FamilyNematode Cuticular CollagenInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24637COLLAGENInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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Expression pattern
 Expression trend for OS493_037259-T1 global co-expression network
TOP