Gene detail

Detailed information of OS493_037660-T1 in Lophelia pertusa

Genomic Location: scaffold_446:54269...63472
NR annotation: KAJ7382017.1, hypothetical protein OS493_037660 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9R0Q8	C-type lectin domain family 4 member E OS=Mus musculus OX=10090 GN=Clec4e PE=1 SV=1
O08523	Alpha-tectorin OS=Mus musculus OX=10090 GN=Tecta PE=1 SV=2
Q5R5C1	Uromodulin OS=Pongo abelii OX=9601 GN=UMOD PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00100	Zona_pellucida	Zona pellucida-like domain	Family	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001507	Domain	Zona pellucida domain	Interproscan
IPR042235	Homologous_superfamily	Zona pellucida, ZP-C domain	Interproscan
IPR033989	Domain	CD209-like, C-type lectin-like domain	Interproscan
IPR048290	Domain	Zona pellucida domain, chordate-type	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14002	ENDOGLIN/TGF-BETA RECEPTOR TYPE III	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan

Expression pattern