Detailed information of OS493_040221-T1 in Lophelia pertusa

Genomic Location: scaffold_1897:5039...8196
NR annotation: KAJ7388041.1, Neuronal growth regulator 1, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q58DA5Neurotrimin OS=Bos taurus OX=9913 GN=NTM PE=2 SV=1
Q62718Neurotrimin OS=Rattus norvegicus OX=10116 GN=Ntm PE=1 SV=1
Q99PJ0Neurotrimin OS=Mus musculus OX=10090 GN=Ntm PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

Expression pattern
 Expression trend for OS493_040221-T1 global co-expression network
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