Gene detail

Detailed information of PFX11121.1 in Stylophora pistillata

Genomic Location: Spis.scaffold3576:18...1976
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02223 all species →	Thymidylate_kin	Thymidylate kinase	Domain	Interproscan
PF07943 all species →	PBP5_C	Penicillin-binding protein 5, C-terminal domain	Domain	Interproscan
PF13177 all species →	DNA_pol3_delta2	DNA polymerase III, delta subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR037167 all species →	Homologous_superfamily	D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily	Interproscan
IPR012907 all species →	Domain	Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal	Interproscan
IPR039430 all species →	Domain	Thymidylate kinase-like domain	Interproscan
IPR018095 all species →	Conserved_site	Thymidylate kinase, conserved site	Interproscan
IPR018094 all species →	Family	Thymidylate kinase	Interproscan
IPR015956 all species →	Homologous_superfamily	Penicillin-binding protein, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10344 all species →	THYMIDYLATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004798 all species →	Molecular Function	thymidylate kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006227 all species →	Biological Process	dUDP biosynthetic process	Interproscan
GO:0006233 all species →	Biological Process	dTDP biosynthetic process	Interproscan
GO:0006235 all species →	Biological Process	dTTP biosynthetic process	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0009002 all species →	Molecular Function	serine-type D-Ala-D-Ala carboxypeptidase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004180 all species →	Molecular Function	carboxypeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX11121.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.