Gene detail

Detailed information of PFX11383.1 in Stylophora pistillata

Genomic Location: Spis.scaffold2659:682...5616
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00210 all species →	Ferritin	Ferritin-like domain	Domain	Interproscan
PF01479 all species →	S4	S4 domain	Domain	Interproscan
PF00578 all species →	AhpC-TSA	AhpC/TSA family	Domain	Interproscan
PF00163 all species →	Ribosomal_S4	Ribosomal protein S4/S9 N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008331 all species →	Domain	Ferritin/DPS protein domain	Interproscan
IPR002942 all species →	Domain	RNA-binding S4 domain	Interproscan
IPR005709 all species →	Family	Small ribosomal subunit protein uS4, bacterial-type	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR022801 all species →	Family	Small ribosomal subunit protein uS4	Interproscan
IPR001912 all species →	Domain	Small ribosomal subunit protein uS4, N-terminal	Interproscan
IPR000866 all species →	Domain	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Interproscan
IPR012347 all species →	Homologous_superfamily	Ferritin-like	Interproscan
IPR036986 all species →	Homologous_superfamily	RNA-binding S4 domain superfamily	Interproscan
IPR018079 all species →	Conserved_site	Small ribosomal subunit protein uS4, conserved site	Interproscan
IPR009078 all species →	Homologous_superfamily	Ferritin-like superfamily	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11831 all species →	30S 40S RIBOSOMAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008199 all species →	Molecular Function	ferric iron binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0042274 all species →	Biological Process	ribosomal small subunit biogenesis	Interproscan
GO:0016209 all species →	Molecular Function	antioxidant activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX11383.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.