Detailed information of PFX11413.1 in Stylophora pistillata

Genomic Location: Spis.scaffold2573:1966...6422
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09416
all species →		UPF1_Zn_bindRNA helicase (UPF2 interacting domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018999
all species →		DomainRNA helicase UPF1, Cys/His rich zinc-binding domainInterproscan

 PANTHER
No PANTHER signature was detected for PFX11413.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →		Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003724
all species →		Molecular FunctionRNA helicase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PFX11413.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP