Detailed information of PFX12135.1 in Stylophora pistillata

Genomic Location: Spis.scaffold1566:24332...27997
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00476
all species →
DNA_pol_ADNA polymerase family AFamilyInterproscan
PF03796
all species →
DnaB_CDnaB-like helicase C terminal domainDomainInterproscan
PF01807
all species →
zf-CHC2CHC2 zinc fingerDomainInterproscan
PF13155
all species →
Toprim_2Toprim-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001098
all species →
DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036977
all species →
Homologous_superfamilyDNA Primase, CHC2-type zinc fingerInterproscan
IPR034154
all species →
DomainArchaeal primase DnaG/twinkle-like, TOPRIM domainInterproscan
IPR002298
all species →
FamilyDNA polymerase AInterproscan
IPR007694
all species →
DomainDNA helicase, DnaB-like, C-terminalInterproscan
IPR002694
all species →
DomainZinc finger, CHC2-typeInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006171
all species →
DomainTOPRIM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10133
all species →
DNA POLYMERASE IInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003887
all species →
Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260
all species →
Biological ProcessDNA replicationInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0006261
all species →
Biological ProcessDNA-templated DNA replicationInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0003896
all species →
Molecular FunctionDNA primase activityInterproscan
GO:0006302
all species →
Biological Processdouble-strand break repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PFX12135.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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