Gene detail

Detailed information of PFX13184.1 in Stylophora pistillata

Genomic Location: Spis.scaffold1045:53709...61511
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

dpp3

ATGAGAGCTCGCACCAGCTCTCCCTCTCTAACCAACATGGCCGGCGTGTTGGACATGTCTCAGTACACCATTTCAAGGGAAGTCGATGTAAATCTTCTGGATTGTAGAACAGCTTTTTCTGGGCTGACAGAGAAAGAAAAGCACTACGCTCATTTCTTGTGTCGTGCCTCATGGGAAGGTGCTCTTATTTGTTTGCTCCAAACGTCGCCGGAATCTCCTGGAATTTTTCTTCTTCTACAAGAATTGTTCCAAGAAGAATCTGTGGAGGAACTCAAAGAGAGAGTTTTAAAATCCGAAAATGGCCCCTCCAAGGAAGAACTTGAGAGTTTTCTAATTTATGCTGCAGCATTCTATGGCAATGTTGGAAACTACAAATCATTTGGTGACACCAAATTTGTTCCAGATTTACCAAAGGAAAAACTGGAAAGTGTAGTTTTCTCAAGTAAAGCCTATGAAAAAAATGCCAAAAGGGTTGAGCAACTGTGGAGTGACTGTGGAGATATGATGTATTCGCTTACCTCCAAATCTCGACAGCTTGGTCTTGGTGAGCAGGGTCTTTCAACATATTATTCCAGTAATTGTACTAAGGATGATGCTGAATTGGCACAAGAGTTCATGAAAGAAAAGGATATAGAGACCTATAACACAAGATTATTTAAGGAGAAGAAAGATGGTCAGGTGACATACATTCTTCGCATAGCTTCAGTAGCAACAACCGCAGAGCCATGTCCTGAGGCAGATGGAGAAGACAAAGTAGTAACAGTTTTGGGTTCTCATGAATTCAAAGGCTGCACCTTTAGGGTGGAGAGAGGAGACTATTCTGGTCTACTTAAAAGAGTTGTAGAAAATCTGGAGAAAGCTAAGGAGTTTACTGCTAATGAAAATGAACTGTCCATGATAAAGAACTATATATACAGCTTCAACACAGGCTCCATTCAAGCCCATAAGGATGGCTCTAGGTACTGGATCAGAGACAAGGGACCCATTGTTGAAACTTACATAGGATTTATTGAGACATACAGAGACCCTTCTGGGGTGCGAGCAGAGTATGAAGGGTTTGTCTCAGTTGTTAACAAAGAAATGAGTGCCAAGTTTGCATCACTGGTGTCCAGTGCTGAGCAGTTGCTTCCTGAGCTGCCATGGCCTCCTGCATATGAGAAGGACAAATTTTTACGACCAGACTTCACTTCACTTGATGTGCTGGGCTTTGGAAGCAGTGGTATACCAGCTGGAATCAACATTCCTAATTATGATGACATTCGTCAAGAAGAAGGCTTTAAAAATGTGTCTTTAGGAAATGTACTGGCAGCTCAGTCAGTTGACAAGAAGGTCACTTTCTTAAGTGACGAGGATCAAGAACTGTTCACAAAGCTCAAAGCCGCATCCTTTGAAGTACAAGTTGGCCTCCATGAACTCTTGGGCCATGGAAGTGGCAAGCTCTTTGTTAAGAAAAATGATGGTACATATAATTTTGACATTGAAAGTGTGATGCACACAGAAACTGGAGAAAAGATCTCCAGCTGGTATACTGACGGGGAGACCTGGTACACACGGTTTGCTGACTTGAGCTCATCATATGAAGAATGTCGTGCAGAGTGTGTGGGAATCTACCTGTGTACCTCTAAGGAAGTTCTCAGGATATTTGGGCATGAAGGCACTGATGCTGATAATATAGTTTATATCAACTGGCTGAATATGGTCCGTGCAGGTCTGTTAGGGCTAGAATTTTATACTCCTGAGAATAACAAATGGCGTCAGGCTCACATGCAAGCACGATATGTCATTCTACAAGTGCTCCTTGAAGCAGGAGAAAAGCTGGTACAAGTGACCAGTATCGCAGGCTCAGATGGTAAACCAGATGTGTTGGTGACACTGGATAGGACAAAGATTGAATCCGTAGGAAGGCCAGCTATTGGAAACTTCCTCAGAAAACTACAGGTGTACAAGTCAACAGCAGATTACAATGCTGGTAGAGCTTTGTATGATCGATACTCAGCTGTCAATGAGGAATTCTTAGCATTGCGCAAGACAGTTCTTGCAAGAAAGACTCCACGTAGGATGTTTGTTCAATGTCATACAAGCATTACAGGAGACAATGATGTTAGATTAACAGAATTTGAAGCAAGCCCTGCTGGGATGATCAAGTCATTCACAACTCGCTTTCCTGGAGAAGACAGTGTGTTGGAAGAGCTATGGAGAGCTGAGATGCCATACCACAAGTTATGA

Transcript

rna-Spis22756_mrna

ATGAGAGCTCGCACCAGCTCTCCCTCTCTAACCAACATGGCCGGCGTGTTGGACATGTCTCAGTACACCATTTCAAGGGAAGTCGATGTAAATCTTCTGGATTGTAGAACAGCTTTTTCTGGGCTGACAGAGAAAGAAAAGCACTACGCTCATTTCTTGTGTCGTGCCTCATGGGAAGGTGCTCTTATTTGTTTGCTCCAAACGTCGCCGGAATCTCctggaatttttcttcttctacaAGAATTGTTCCAAGAAGAATCTGTGGAGGAACTCAAAGAGAGAGTTTTAAAATCCGAAAATGGCCCCTCCAAGGAAGAACTTGAGAGTTTTCTAATTTATGCTGCAGCATTCTATGGCAATGTTGGAAACTACAAATCATTTGGTGACACCAAATTTGTTCCAGATTTACCAAAGGAAAAACTGGAAAGTGTAGTTTTCTCAAGTAAAGCCTatgaaaaaaatgccaaaaggGTTGAGCAACTGTGGAGTGACTGTGGAGATATGATGTATTCGCTTACCTCCAAATCTCGACAGCTTGGTCTTGGTGAGCAGGGTCTTTCAACATATTATTCCAGTAATTGTACTAAGGATGATGCTGAATTGGCACAAGAGTTCATGAAAGAAAAGGATATAGAGACCTATAACACAAGATTATTTAAGGAGAAGAAAGATGGTCAGGTGACATACATTCTTCGCATAGCTTCAGTAGCAACAACCGCAGAGCCATGTCCTGAGGCAGATGGAGAAGACAAAGTAGTAACAGTTTTGGGTTCTCATGAATTCAAAGGCTGCACCTTTAGGGTGGAGAGAGGAGACTATTCTGGTCTACTTAAAAGAGTTGTAGAAAATCTGGAGAAAGCTAAGGAGTTTACTGCTAATGAAAATGAACTGTCCATGATAAAGAACTATATATACAGCTTCAACACAGGCTCCATTCAAGCCCATAAGGATGGCTCTAGGTACTGGATCAGAGACAAGGGACCCATTGTTGAAACTTACATAGGATTTATTGAGACATACAGAGACCCTTCTGGGGTGCGAGCAGAGTATGAAGGGTTTGTCTCAGTTGTTAACAAAGAAATGAGTGCCAAGTTTGCATCACTGGTGTCCAGTGCTGAGCAGTTGCTTCCTGAGCTGCCATGGCCTCCTGCATATGAGAAGGACAAATTTTTACGACCAGACTTCACTTCACTTGATGTGCTGGGCTTTGGAAGCAGTGGTATACCAGCTGGAATCAACATTCCTAATTatgatGACATTCGTCAAGAAGAAGGCTTTAAAAATGTGTCTTTAGGAAATGTACTGGCAGCTCAGTCAGTTGACAAGAAGGTCACTTTCTTAAGTGACGAGGATCAAGAACTGTTCACAAAGCTCAAAGCCGCATCCTTTGAAGTACAAGTTGGCCTCCATGAACTCTTGGGCCATGGAAGTGGCAAGCTCTTTGTTAAGaaaaatgatGGTACATATAATTTTGACATTGAAAGTGTGATGCACACAGAAACTGGAGAAAAGATCTCCAGCTGGTATACTGACGGGGAGACCTGGTACACACGGTTTGCTGACTTGAGCTCATCATATGAAGAATGTCGTGCAGAGTGTGTGGGAATCTACCTGTGTACCTCTAAGGAAGTTCTCAGGATATTTGGGCATGAAGGCACTGATGCTgataatatagtttatatcaACTGGCTGAATATGGTCCGTGCAGGTCTGTTAGGGCTAGAATTTTATACTCCTGAGAATAACAAATGGCGTCAGGCTCACATGCAAGCACGATATGTCATTCTACAAGTGCTCCTTGAAGCAGGAGAAAAGCTGGTACAAGTGACCAGTATCGCAGGCTCAGATGGTAAACCAGATGTGTTGGTGACACTGGATAGGACAAAGATTGAATCCGTAGGAAGGCCAGCTATTGGAAACTTCCTCAGAAAACTACAGGTGTACAAGTCAACAGCAGATTACAATGCTGGTAGAGCTTTGTATGATCGATACTCAGCTGTCAATGAGGAATTCTTAGCATTGCGCAAGACAGTTCTTGCAAGAAAGACTCCACGTAGGATGTTTGTTCAATGTCATACAAGCATTACAGGAGACAATGATGTTAGATTAACAGAATTTGAAGCAAGCCCTGCTGGGATGATCAAGTCATTCACAACTCGCTTTCCTGGAGAAGACAGTGTGTTGGAAGAGCTATGGAGAGCTGAGATGCCATACCACAAGTTATGATGACATAACATAAACCTCACCAGAAAAAATTCTCCTGGCTAAAACTTAATCTTGTGATTTCAATTGCACAGATACTAATATTGTCACCAACCTGCACAGCAGGCATAAACTAAATGGGAAAATTTTATGGGGTGGGGGGGTTGTTTCCTCCTTCTCCTTGCACATCTACCCCATCCCTCCACCCTTAAGTccccctttttttcttaatttatttttcccaTTCCCCATGTTTTCCTTGCTAAAAGTGCAACATTTCAACTTCTTTTCACCAAATTGTAATTTTGGCTAGTGTTGTCTAGTGTTCTTGTATGGCTACTCATGAATAAAACTGTGTTACTTTATTGCCTTTGAAACTGActaaattttactttaagttaTTGATTgttagcagttttttttttttaaattcccttCAACTCTAAAAGTTATCGAGTATTGTCGTCAGGAAGTGTAAACAAATGGTTGTGGGAGATGCATTTTAAAAGATGAGTGGCTTGTGGACTTCAGATTGGGGATGGAGTTCTGCAGAGGGCTTGTTTTTACCAAAGTCTCAGTGAGAGTAATATTATTACTGGAAAGGTCCCATCATAATAGCCAACTGTTATGATTGCATTTCAACAAATGAAATCTTGCATTTAATATGGGGTTCTCAAATGATACACTCAAAAGGAAATTGCAACATTTCTCAGTCTTCAACGTTAAAtagcattttgatttttttgtccACAGCATCTCTGGGTGTACTAACAACAGTACTGCTGCTAGTATTCCAACCCTCAAAGCACTGATTAATG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03571 all species →	Peptidase_M49	Peptidase family M49	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039461 all species →	Family	Peptidase family M49	Interproscan
IPR005317 all species →	Family	Dipeptidyl-peptidase 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23422 all species →	DIPEPTIDYL PEPTIDASE III-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008235 all species →	Molecular Function	metalloexopeptidase activity	Interproscan
GO:0008239 all species →	Molecular Function	dipeptidyl-peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01277	DPP3; dipeptidyl-peptidase III	EC:3.4.14.4	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.