Gene detail

Detailed information of PFX14065.1 in Stylophora pistillata

Genomic Location: Spis.scaffold844:51434...62297
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ZFYVE1

ATGAAAGTGACCAAAGATATGGCTGCCACTTTACCCGATGACGATGATCTAGATGAAGTTATGCTTATGAACCATCCTGTAACAAAATCCTCCGCTCGAAGTGGCAAGGAAAGGAAAAATGAACCCACTGCAACATCAAGAGTTAGAGAAGACATTTCCCAAGCGCCGAAGAGCTTTTTGTTGCTTAACGAAATGGAAATTCTCCAGGTGCATACAGTAGAGGACTTCATTGCTAAGTTGTCCTGTCATGGCGACACCAGCATGAAAGTTGTATCCATATTTGGTAACACAGGTGATGGAAAATCACACACCCTTAACCATGTCTTCTTCTGTGGCAAAGAAGTATTTGGGACTTCACCATCTCAGCTCTCCTGCACAGTTGGTGTTTGGGCTGCCTATGATGAGGGTAGTCGGGTGGTTGTCTTGGATACCGAAGGGCTATTGGGTATGTCAGGCAATCAGAACCAACGTACAAGGCTATTACTGAAGGTCCTAGCAATATCTGACATTATCATCTATAGGACAAGAGCTGAAAGGCTCCACACAGACATGTTTACTTTCTTGGGGGATGCATCAGATGCCTATCTAAAACATTTCACCAAGGAGCTGAAAGATGCTACAGAACGATGCCACATGGATGTGCCCCTATGCAATCTTGGTCCAGCTGTGATCATCTTTCATGAGACACAGCATACCCATTTACTAGGAGTGTCAGAGAATGAGGCAAATCCATCAGAAAATCTGAAGAGTCCTGATGAGATTTTAAAGGAGAGATTTGCAAATGTAGGAAGAGTTCCTCATGCATTTAGTTCTATCAAGTACCTAGGAACAAGGACAGAGACTCCACCAACAAACTTCAAGGGATTGAAGCAAGCTGTAAAGGGATGTTTAGGGGACAGCTCTGTGCGCTCGTCACGATCACCTACTGTCATTTATAAAGCTTTGATGCTCCTAAATGAGAAGTTCAGTGGGGACATTGAAAGAACAATACCAAACACTTTCCCTGACGAATATTTCACTTGCCAGGCAGCGTGCCTCTCATGCCAAGCACGCTGTCAAAAGAGCATGAAACACGAGAATGAGGAATCATCAGCACACCACAGTGATGTCAGATGTCGCTATCAAGCCCAGTTTGACAACAGGATTTTTACTTGTAGGGCCTGTTATGAGAGGGGAAAACAGAATTTGGTTGTTCCAAAAATGTGCTCCTCCAATGATTCATCTTGGCTTGGACTTGCTAAATATGCCTGGTCAGGATATGTTCTGGAGTGCCCAGAATGTGGTGTCATCTACCGTAGCCGCCAGTACTGGTTTGGAAATGAGGACCCAGTTAAGACTGTGGTTAGGACTGAGCTTCGCCATGCATGGCCTGGGCAAACATTTGCTAAGCTGGATGGTGGCAATGCGGCCAGACGGTTTTTGGATCATATCAGTTATGTCACTGATGCAGTTAGCAGTCTCAGCAGTCCTTCCAGTCAGGCAGTAACCAACTGGATCACAGACCAAGTGGCCCCAGATTATTGGGTCCCAAATTCTGAAATAACTGCTTGTCAGGTATGCCGTCAAATATTCAGGGATGGGGAGACTAAGCACCACTGTCGTGCCTGTGGGGGTGGGGTCTGCGATGGATGTTCAACTAATAAGAAACCTGTACCAGAACGAGGTTGGGGTGAGGGGCCAGTACGAGTGTGTGACCGCTGTTTTGGAAAAACGTCAACAGTGGAGGCCCAGCCTCAACCCACATGTGACTTAAGTGATTTATCAGATGCACTTGAAGAGGAGACTCCTCAAGAAATTGTGCACCCTGAAATTGACCATAGTCTGTATTCTGAAAACCCATTTGGACCAGTAGCTGCCCGAAAAGTAACAGAGGTTGTTCAATCCGCTGTGGGGGTTTTAAAAACGGCCATAGTTTATCCAAAGGGGTTCATCACTGATGCAGCAAGGCCAGGCTACTGGGTACCAGACTCTCAAATTTTAGCCTGTAACTGTTGTGAAACTGAATTCAAGGGAAGTGATACCAAACATCACTGCCGAGCTTGTGGTATGGGTGTCTGTAGCACCTGTTCAGAAAGTAGGAGACCTGTGGCTTCAAGAGGTTGGGATCACCCAGTCAGAGTCTGTGACCATTGTGCTGCTAAAAAAGGACAGCTTTAG

Transcript

rna-Spis21807_mrna

ATGAAAGTGACCAAAGATATGGCTGCCACTTTACCCGATGACGATGATCTAGATGAAGTTATGCTTATGAACCATCCTGTAACAAAATCCTCCGCTCGAAGTGGCAAGgaaaggaaaaatgaacCCACTGCAACATCAAGAGTTAGAGAAGACATTTCCCAAGCGCCGAAGAGCTTTTTGTTGCTTAACGAAATGGAAATTCTCCAGGTGCATACAGTAGAGGACTTCATTGCTAAGTTGTCCTGTCATGGCGACACCAGCATGAAAGTTGTATCCATATTTGGTAACACAGGTGATGGAAAATCACACACCCTTAACCATGTCTTCTTCTGTGGCAAAGAAGTATTTGGGACTTCACCATCTCAGCTCTCCTGCACAGTTGGTGTTTGGGCTGCCTATGATGAGGGTAGTCGGGTGGTTGTCTTGGATACCGAAGGGCTATTGGGTATGTCAGGCAATCAGAACCAACGTACAAGGCTATTACTGAAGGTCCTAGCAATATCTGACATTATCATCTATAGGACAAGAGCTGAAAGGCTCCACACAGACATGTTTACTTTCTTGGGGGATGCATCAGATGCCTATCTAAAACATTTCACCAAGGAGCTGAAAGATGCTACAGAACGATGCCACATGGATGTGCCCCTATGCAATCTTGGTCCAGCTGTGATCATCTTTCATGAGACACAGCATACCCATTTACTAGGAGTGTCAGAGAATGAGGCAAATCCATCAGAAAATCTGAAGAGTCCTGATGAGATTTTAAAGGAGAGATTTGCAAATGTAGGAAGAGTTCCTCATGCATTTAGTTCTATCAAGTACCTAGGAACAAGGACAGAGACTCCACCAACAAACTTCAAGGGATTGAAGCAAGCTGTAAAGGGATGTTTAGGGGACAGCTCTGTGCGCTCGTCACGATCACCTACTGTCATTTATAAAGCTTTGATGctcCTAAATGAGAAGTTCAGTGGGGACATTGAAAGAACAATACCAAACACTTTCCCTGACGAATATTTCACTTGCCAGGCAGCGTGCCTCTCATGCCAAGCACGCTGTCAAAAGAGCATGAAACACGAGAATGAGGAATCATCAGCACACCACAGTGATGTCAGATGTCGCTATCAAGCCCAGTTTGACAACAGGATTTTTACTTGTAGGgCCTGTTATGAGAGGGGAAAACAGAATTTGGTTGTTCCAAAAATGTGCTCCTCCAATGATTCATCTTGGCTTGGACTTGCTAAATATGCCTGGTCAGGATATGTTCTGGAGTGCCCAGAATGTGGTGTCATCTACCGTAGCCGCCAGTACTGGTTTGGAAATGAGGACCCAGTTAAGACTGTGGTTAGGACTGAGCTTCGCCATGCATGGCCTGGGCAAACATTTGCTAAGCTGGATGGTGGCAATGCGGCCAGACGGTTTTTGGATCATATCAGTTATGTCACTGATGCAGTTAGCAGTCTCAGCAGTCCTTCCAGTCAGGCAGTAACCAACTGGATCACAGACCAAGTGGCCCCAGATTATTGGGTCCCAAATTCTGAAATAACTGCTTGTCAGGTATGCCGTCAAATATTCAGGGATGGGGAGACTAAGCACCACTGTCGTGCCTGTGGGGGTGGGGTCTGCGATGGATGTTCAACTAATAAGAAACCTGTACCAGAACGAGGTTGGGGTGAGGGGCCAGTACGAGTGTGTGACCGCTGTTTTGGAAAAACGTCAACAGTGGAGGCCCAGcctcaacccacatgtgactTAAGTGATTTATCAGATGCACTTGAAGAGGAGACTCCTCAAGAAATTGTGCACCCTGAAATTGACCATAGTCTGTATTCTGAAAACCCATTTGGACCAGTAGCTGCCCGAAAAGTAACAGAGGTTGTTCAATCCGCTGTGGGGGTTTTAAAAACGGCCATAGTTTATCCAAAGGGGTTCATCACTGATGCAGCAAGGCCAGGCTACTGGGTACCAGACTCTCAAATTTTAGCCTGTAACTGTTGTGAAACTGAATTCAAGGGAAGTGATACCAAACATCACTGCCGAGCTTGTGGTATGGGTGTCTGTAGCACCTGTTCAGAAAGTAGGAGACCTGTGGCTTCAAGAGGTTGGGATCACCCAGTCAGAGTCTGTGACCATTGTGCTGCTAAAAAAGGACAGCTTTAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR042427 all species →	Family	Zinc finger FYVE domain-containing protein 1	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46624 all species →	AGAP002036-PA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005545 all species →	Molecular Function	1-phosphatidylinositol binding	Interproscan
GO:0005547 all species →	Molecular Function	phosphatidylinositol-3,4,5-trisphosphate binding	Interproscan
GO:0005811 all species →	Cellular Component	lipid droplet	Interproscan
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0043325 all species →	Molecular Function	phosphatidylinositol-3,4-bisphosphate binding	Interproscan
GO:0140042 all species →	Biological Process	lipid droplet formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17603	ZFYVE1; zinc finger FYVE domain-containing protein 1	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.