Gene detail

Detailed information of PFX14208.1 in Stylophora pistillata

Genomic Location: Spis.scaffold820:56544...69840
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

AWC38_SpisGene21655

ATGAGAAACGACAGAAAGAAGCGTAAGCGGCTTCAGAGAAAAAAAGTTAAAGAGGATGAAGCAAGGAAGGCAGTTTCCGAACGCATACGTAAGGAAACCATGCAGAAAGATCGATTCCTATACCTTGCAAGGAAATATTACTTGAAGTGGCAACAAATAAACAAGGCCCATAAAAAACTTCAAGAAAAAGCTGGTACCCTATCACCGGTTTCTAGATTTGGAACCAACCCTAGGCTTTTTTCCCCACAAGGTATTATATCTGGCAGACATATACCAGAAATTTCTCCATACCAGTTAAGGGCTCCACAAGACAATGGCAATAAAGACATCACAGTTCACCTTGGTCATGGTGTATTTGGTAGTTGTCAAAAAAAGTATTACAAGGGAATTCCAGTAGCTGTGAAGGAGTACAATAACCTATCTTCTACTAAGGATATTCAACGTGAAGCAGATGTAATGGCAAGATGTTCCCATCCATCTCTTCCTCACATCTTTGGAGTCAATGTAACACAAAAACCTTACTTTCTGGTTTCCTATTTCTATGGTATTAACAACCAGACTTGTACTTTGTACAGTGCATTATACCATCCCACCATACCCTTCACAAAATATTGTGCTGGAAAGATTATGTTTGAACTGTGCCAAGCTCTACAGCACCTTCACATGAAACAACTTCTCCATCGAGATATCAAAAGTGATAATATTCTCCTGACAATTCTGCACACAGGATTTCATCCCATGCTCATTGATTTTGGCAAGTCCATTAAAGTATCTGAAGCTACTTCCAAAAGGAAGAGTCTAAGTGCACATGAACAGGATGGCTACCGTAAAAAGTACAGACACATTGCTCCTGAAATTATTCTTGGCCAGCCACCATCATTTGCTTCCGATTTATTTTCATTTGGTGTAGTCATGTCTGATATCAGTGCCAACATTCCTTGTGAAAATTGCTTTCTTGAAGGAAAAAGGAAATGCTTAGAAGAAGATCCCAAATTAAGATGTTCGATTGCGTACCTTCTCAATCAGCTTGAAAGAAATCTTTTTTCCCCACAAGGTATTATATCTGGCAGACATATACCAGAAATTTCTCCATACCAGTTAAGGGCTCCACAAGACAATGGCAATAAAGACATCACAGTTCACCTTGGTCATGGTGTATTTGGTAGTTGTCAAAAAAAGTATTACAAGGGAATTCCAGTAGCTGTGAAGGAGTACAATAACCTATCTTCTACTAAGGATATTCAACGTGAAGCAGATGTAATGGCAAGATGTTCCCATCCATCTCTTCCTCACATCTTTGGAGTCAATGTAACACAAAAACCTTACTTTCTGGTTTCCTATTTCTATGGTATTAACAACCAGACTTGTACTTTGTACAGTGCATTATACCATCCCACCATACCCTTCACAAAATATTGTGCTGGAAAGATTATGTTTGAACTGTGCCAAGCTCTACAGCACCTTCACATGAAACAACTTCTCCATCGAGATATCAAAAGTGATAATATTCTCCTGACAATTCTGCACACAGGATTTCATCCCATGCTCATTGATTTTGGCAAGTCCATTAAAGTATCTGAAGCTACTTCCAAAAGGAAGAGTCTAAGTGCACATGAACAGGATGGCTACCGTAAAAAGTACAGACACATTGCTCCTGAAATTATTCTTGGCCAGCCACCATCATTTGCTTCCGATTTATTTTCATTTGGTGTAGTCATGTCTGATATCAGTGCCAACATTCCTTGTGAAAATTGCTTTCTTGAAGGAAAAAGGAAATGCTTAGAAGAAGATCCCAAATTAAGATGTCTTGTTGCGTCAGCCGCTGGTACTGATGCTTTAAAGGCGACTTTTAGCATGGGTGGAATTAAGGGTGACGTGACCTTCTCTCAATCTCAAGGGCAGTATTCCTCAGAAGTTATGGTCAACTTAACAGGCGTCTCTGCGACATTAAAATGGAGCATACGACAATTACCTATGATCTACAATGGCAACGCTAATTTGAGCTGTAAAGCAGGCGCAGTGGGAGGTGTGTTTGACCCAAAGATGGCAGAGGCGTCTGCTGACTATGAGACCAACTGCCAATTGAGCAATAGTTTAAGATTTCAATCATGCGCAGTTGGTGCTTTATCCAGAATGCTCGGAAATCTGGACAGCAATAAGCAAGAATACAAATATTCAGACTGGAGGTTGATGATTCCCATCAGTGGCCCGTATAGTGTCATGGGTAAGGCATTAGTCCTGTACGATGGTGACATGCCCAAAGCATGTGCACTGATTGCTCCTACCCAGCCTATGAAAACATTCGTAGCTGTTTTCAAGGGTCCAGTTGCAGGCTTTGTGTACTTCAGACAAGTTGATGAGAACTCGGATACCTCTGTGTTTGTTGATCTCTTCTTTGTCAACGGTACCAATTCTAATAAAGACTTTTCATGGCAAATTAACCAGGGCGTGGTCAGTCATGATGCCTCCGATCCATCTTCCTATTGCAAGAATGTTGGCCAAATTTTTAACCCGAAAAACATGAACGATGCAAGCTGTAGTAAAACCATGCATGGTAAATGCGCCATTGGTGATATGACGTCCAAACATGGAAAAATCGAAGTCTCATTGGCAACCAAAATGCAGTCATCTACAAAAGCGGCATTCACCGACACCAACCTTCCCTTGAGCGGCGATGACTCCGTCCAGGGCGAAACCCTGTTGCTGTTTCCAAGCGACCCAATACAGGCTATTGCCTGTGCGAAGATCGTACGATTAGAGCCGAAAACACTGAAAGTTTCGTTCGATGGAAGTGTTCAGGAAGGTGTGACTGGCCATTTCATGTTTACGCAGTCCTCGCCTTTTGATGCCACGACAGCAGAGATCAAACTGACTGGGCTCAATAAAAAGGCTCAAGGGTACCACATACACGCCTACCCAAGCCCATCGTACATGCACTTATTGCCAAATGAGTCATGCACTGGACTTATTGCCGGAGATCACTGGAATCCTTACAATGTCGATATTAAAACCAGTCCTCCTGCAGGCACAGGAACAGACGATGAATACGAAGTTGGTGACTTAAGTGGAAAGTATGGGACCTTTTTAAACCGCTCTTCATTCAGCAAAACGGTCAGGGACTACAATCTTCCAATGTTTGGTAGAAACAGCATCCAGGGACGCTCTTTAGTCATCCACAAACTGAAGATTCAGGACAACAATATGCGCTGGGTCTGCAATGACCTCATGCCAGAGGTCGACAAAGGTATCACCTACTTCATGAAAGCCATCGCAAATATCAGCGGACCGGCGGTAAAGGGAATGGTTGTACTGGAACAGTACTTGTCTAGCTCGCCAAATGTGGCTGAGGTCGAATCCACAATTTACATCAACATCGAACACAGCCAAGATTCTGAGTCAACGAGTGGTCACCGGTATGGTGTACATAAAAATCCTGTAGGCGAAGATGCAAGTTACACAGACGTTAGCAGGAGATGCATGAGTTTGGAAGGGAACTTTAATCCATACGCAGTGTATACTAAGGGAGACTACTCGTCCACCTGTAGTCCAACTAACATGTTGCGCTGTGAATCCGGAGATTTGTCTGGTAAACACGACCCTCTCGAAGTGGGCGACGGCCGTGTGTTTTTCAACGATGTCAATCTTCCGTTATTTGGCATTGACTCCGTCGCTGGCCATGGCATAGCTGTGAATGCTAAAGATGGAGGTAGTGACCGAATCGGTTGCGCCAATCTCATAGTGGAAGGATCTTTATATGCAGAAAGATCCCTCGAGTTCCCGAAAAAGGCTGCCTTTTCCAGTTTCCATTTTGCCGATATCATCTCTAAAGCTTTGGGAATTCCAAAGTGGCGACTTTTCATGATTCGCACAGAGGAAGGCAGTGTTTCCGAGTGCATGAAAGTCAAGTTTGCAATAGTCGGCAATGCGAATCAAGTCATCCAACCTGTCACAAAATTTGACGATCTCAAGCAAAATAATCCTGAAGCGTTCAAACCCTACACATGCAACCCCTCGACAACAAGTGGATTACTTCCAGACCCCTCGACAACAAGTGGATTACTTCCAGACCCCTCGACAACAAGTGGAGCACTTTGTTATCACTCAAGCTTCCTACTATCCATCATTGTTGTGGTGGTCGTTGCTTTTATGGGCTAA

Transcript

rna-Spis21655_mrna

ATGAGAAACGACAGAAAGAAGCGTAAGCGGcttcagagaaaaaaagttaaagaggATGAAGCAAGGAAGGCAGTTTCCGAACGCATACGTAAGGAAACCATGCAGAAAGATCGATTCCTATACCTTGCAAGGAAATATTACTTGAAGTGGCAACAAATAAACAAGGCCCAtaaaaaacttcaagaaaaagctGGTACCCTATCACCGGTTTCTAGATTTGGAACCAACCCTAGGCTTTTTTCCCCACAAGGTATTATATCTGGCAGACATATACCAGAAATTTCTCCATACCAGTTAAGGGCTCCACAAGACAATGGCAATAAAGACATCACAGTTCACCTTGGTCATGGTGTATTTGGTAGTTGTCAAAAAAAGTATTACAAGGGAATTCCAGTAGCTGTGAAGGAGTACAATAACCTATCTTCTACTAAGGATATTCAACGTGAAGCAGATGTAATGGCAAGATGTTCCCATCCATCTCTTCCTCACATCTTTGGAGTCAATGTAACACAAAAACCTTACTTTCTGGTTTCCTATTTCTATGGTATTAACAACCAGACTTGTACTTTGTACAGTGCATTATACCATCCCACCATACCCTTCACAAAATATTGTGCTGGAAAGATTATGTTTGAACTGTGCCAAGCTCTACAGCACCTTCACATGAAACAACTTCTCCATCGAGATATCAAAAGTGATAATATTCTCCTGACAATTCTGCACACAGGATTTCATCCCATGCTCATTGATTTTGGCAAGTCCATTAAAGTATCTGAAGCTACTTCCAAAAGGAAGAGTCTAAGTGCACATGAACAGGATGGCTACCGTAAAAAGTACAGACACATTGCTCCTGAAATTATTCTTGGCCAGCCACCATCATTTGCTTccgatttattttcatttggtgTAGTCATGTCTGATATCAGTGCCAACATTCCTtgtgaaaattgctttcttgaaggaaaaaggaaatgctTAGAAGAAGATCCCAAATTAAGATGTTCGATTGCGTACCTTCTCAATCAGCTTGAAAGAAATCTTTTTTCCCCACAAGGTATTATATCTGGCAGACATATACCAGAAATTTCTCCATACCAGTTAAGGGCTCCACAAGACAATGGCAATAAAGACATCACAGTTCACCTTGGTCATGGTGTATTTGGTAGTTGTCAAAAAAAGTATTACAAGGGAATTCCAGTAGCTGTGAAGGAGTACAATAACCTATCTTCTACTAAGGATATTCAACGTGAAGCAGATGTAATGGCAAGATGTTCCCATCCATCTCTTCCTCACATCTTTGGAGTCAATGTAACACAAAAACCTTACTTTCTGGTTTCCTATTTCTATGGTATTAACAACCAGACTTGTACTTTGTACAGTGCATTATACCATCCCACCATACCCTTCACAAAATATTGTGCTGGAAAGATTATGTTTGAACTGTGCCAAGCTCTACAGCACCTTCACATGAAACAACTTCTCCATCGAGATATCAAAAGTGATAATATTCTCCTGACAATTCTGCACACAGGATTTCATCCCATGCTCATTGATTTTGGCAAGTCCATTAAAGTATCTGAAGCTACTTCCAAAAGGAAGAGTCTAAGTGCACATGAACAGGATGGCTACCGTAAAAAGTACAGACACATTGCTCCTGAAATTATTCTTGGCCAGCCACCATCATTTGCTTccgatttattttcatttggtgTAGTCATGTCTGATATCAGTGCCAACATTCCTtgtgaaaattgctttcttgaaggaaaaaggaaatgctTAGAAGAAGATCCCAAATTAAGATGTCTTGTTGCGTCAGCCGCTGGTACTGATGCTTTAAAGGCGACTTTTAGCATGGGTGGAATTAAGGGTGACGTGACCTTCTCTCAATCTCAAGGGCAGTATTCCTCAGAAGTTATGGTCAACTTAACAGGCGTCTCTGCGACATTAAAATGGAGCATACGACAATTACCTATGATCTACAATGGCAACGCTAATTTGAGCTGTAAAGCAGGCGCAGTGGGAGGTGTGTTTGACCCAAAGATGGCAGAGGCGTCTGCTGACTATGAGACCAACTGCCAATTGAGCAATAGTTTAAGATTTCAATCATGCGCAGTTGGTGCTTTATCCAGAATGCTCGGAAATCTGGACAGCAATAAGCAAGAATACAAATATTCAGACTGGAGGTTGATGATTCCCATCAGTGGCCCGTATAGTGTCATGGGTAAGGCATTAGTCCTGTACGATGGTGACATGCCCAAAGCATGTGCACTGATTGCTCCTACCCAGCCTATGAAAACATTCGTAGCTGTTTTCAAGGGTCCAGTTGCAGGCTTTGTGTACTTCAGACAAGTTGATGAGAACTCGGATACCTCTGTGTTTGTTGATCTCTTCTTTGTCAACGGTACCAATTCTAATAAAGACTTTTCATGGCAAATTAACCAGGGCGTGGTCAGTCATGATGCCTCCGATCCATCTTCCTATTGCAAGAATGTTGGCCAAATTTTTAACCCGAAAAACATGAACGATGCAAGCTGTAGTAAAACCATGCATGGTAAATGCGCCATTGGTGATATGACGTCCAAACATGGAAAAATCGAAGTCTCATTGGCAACCAAAATGCAGTCATCTACAAAAGCGGCATTCACCGACACCAACCTTCCCTTGAGCGGCGATGACTCCGTCCAGGGCGAAACCCTGTTGCTGTTTCCAAGCGACCCAATACAGGCTATTGCCTGTGCGAAGATCGTACGATTAGAGCCGAAAACACTGAAAGTTTCGTTCGATGGAAGTGTTCAGGAAGGTGTGACTGGCCATTTCATGTTTACGCAGTCCTCGCCTTTTGATGCCACGACAGCAGAGATCAAACTGACTGGGCTCAATAAAAAGGCTCAAGGGTACCACATACACGCCTACCCAAGCCCATCGTACATGCACTTATTGCCAAATGAGTCATGCACTGGACTTATTGCCGGAGATCACTGGAATCCTTACAATGTCGATATTAAAACCAGTCCTCCTGCAGGCACAGGAACAGACGATGAATACGAAGTTGGTGACTTAAGTGGAAAGTATGGGACCTTTTTAAACCGCTCTTCATTCAGCAAAACGGTCAGGGACTACAATCTTCCAATGTTTGGTAGAAACAGCATCCAGGGACGCTCTTTAGTCATCCACAAACTGAAGATTCAGGACAACAATATGCGCTGGGTCTGCAATGACCTCATGCCAGAGGTCGACAAAGGTATCACCTACTTCATGAAAGCCATCGCAAATATCAGCGGACCGGCGGTAAAGGGAATGGTTGTACTGGAACAGTACTTGTCTAGCTCGCCAAATGTGGCTGAGGTCGAATCCACAATTTACATCAACATCGAACACAGCCAAGATTCTGAGTCAACGAGTGGTCACCGGTATGGTGTACATAAAAATCCTGTAGGCGAAGATGCAAGTTACACAGACGTTAGCAGGAGATGCATGAGTTTGGAAGGGAACTTTAATCCATACGCAGTGTATACTAAGGGAGACTACTCGTCCACCTGTAGTCCAACTAACATGTTGCGCTGTGAATCCGGAGATTTGTCTGGTAAACACGACCCTCTCGAAGTGGGCGACGGCCGTGTGTTTTTCAACGATGTCAATCTTCCGTTATTTGGCATTGACTCCGTCGCTGGCCATGGCATAGCTGTGAATGCTAAAGATGGAGGTAGTGACCGAATCGGTTGCGCCAATCTCATAGTGGAAGGATCTTTATATGCAGAAAGATCCCTCGAGTTCCCGAAAAAGGCTGCCTTTTCCAGTTTCCATTTTGCCGATATCATCTCTAAAGCTTTGGGAATTCCAAAGTGGCGACTTTTCATGATTCGCACAGAGGAAGGCAGTGTTTCCGAGTGCATGAAAGTCAAGTTTGCAATAGTCGGCAATGCGAATCAAGTCATCCAACCTGTCACAAAATTTGACGATCTCAAGCAAAATAATCCTGAAGCGTTCAAACCCTACACATGCAACCCCTCGACAACAAGTGGATTACTTCCAGACCCCTCGACAACAAGTGGATTACTTCCAGACCCCTCGACAACAAGTGGAGCACTTTGTTATCACTCAAGCTTCCTACTATCCATCATTGTTGTGGTGGTCGTTGCTTTTATGGGCTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00080 all species →	Sod_Cu	Copper/zinc superoxide dismutase (SODC)	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036423 all species →	Homologous_superfamily	Superoxide dismutase-like, copper/zinc binding domain superfamily	Interproscan
IPR053257 all species →	Family	Cu-only superoxide dismutase	Interproscan
IPR001424 all species →	Domain	Superoxide dismutase, copper/zinc binding domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20910 all species →	AGAP001623-PA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0006801 all species →	Biological Process	superoxide metabolic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00106	XDH; xanthine dehydrogenase/oxidase	EC:1.17.1.4 EC:1.17.3.2	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.