Gene detail

Detailed information of PFX14960.1 in Stylophora pistillata

Genomic Location: Spis.scaffold704:7776...19342
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04494 all species →	TFIID_NTD2	WD40 associated region in TFIID subunit, NTD2 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037264 all species →	Homologous_superfamily	TFIID subunit TAF5, NTD2 domain superfamily	Interproscan
IPR007582 all species →	Domain	TFIID subunit TAF5, NTD2 domain	Interproscan
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19879 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367 all species →	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12177	COPS3, CSN3; COP9 signalosome complex subunit 3	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.