Gene detail

Detailed information of PFX15011.1 in Stylophora pistillata

Genomic Location: Spis.scaffold698:2607...18410
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Naa15

ATGGTGCTCAGAGAGGCTGGAAGACCTCAGAAGGCTTTGGATCAGTTGACAGCACATGAATCACTGATGCACGATAAACTTGTGGTGCGAGAAATAAAAGGGTCTCTGTTCCTTGAATTAAAGCAGTTCAGGGAAGCAGAGAGAATTTACAAGGACTTACTAAGGAGAAATCCAGAGAATAAGCATTATTACCAAGAACTGGAAAAAGCCATGCAGTTAGAGAACCCAGATGACCGATACAACCTGTACATGAAGTACTCTGAGTCATATCCAAGAGCACAGGCTCCAAAGAGAATCCCCCTTTCTTTTACATCAGGAGAAACTTTTGCTCGATTAATTGACAACTACATGCGACCAGCGATTCACAAGGGAGTGCCACCTTTGTTTAACAACATTAGGACTTTATACACTGAAAAGGACAAGGCCTGGAAAGTCATGAAATTTAGGGAAAGGCAAGTTCCTTTAAGTTATATTTTTATTGAGATAGAGACAGAGCTTGAATTTAATTTATGGATCACTAACCCTTCTGGTGGTGATCTTGAGCCTCCCACAGCAATCCTTTGGGTGTACCACTTCCTTGCCCAGCATTTTGATTATCTACGGGACAGCAAGAAGGCCATGGAGTACATTGACAAAGCTCTTGAGCATACTCCTACCCTTATTGAGGCATATATGGTCAAAGCCAGGATTTATAAGCATGGGGGAGACATGGAGAAGGCTGCACATTGTATGGATGAAGCAAGATCTCTTGACACTGCTGACAGATATGTCAATTGTAAATGTGCCAAGTACCAACTACGAGCCAATCAGGTTCAAAAAGCTGAGGAAACATGTGGATTGTTCACTAGGGAAGGAGTTGGTGCTGCCGAAAACCTGAATGAAATGCAGTGTATGTGGTTCCAAACTGAGAGTGGTTATGCTCTGCAAAGACAGGGCAAGCTGGGAGAAGCTCTGAAGAAGGCCCATGAGATTGAGAGACATTTTGATGAAATAACAGAAGATCAGTTTGATTTTCATACCTACTGTATGAGAAAAATGACTCTTAGAGCTTATGTGAGACTGCTGCGACTTGAGGACGTTCTTCGAAGCCACAGATTTTATTTCAAAGCTGCTAAAATGGCAATAGAGTGTTATGTTCGGCTCCATGACAAGCCTATGACTGCAAACGACGAAGATGCTGAAGCAGGGTCCAGCGAGCTGTCAGCTAAAGATTTGAAGAAACTACGTAGTAAACAAAGAAGAGCAGAGAAAAAAGCCCAGGAAAGCAAGAAGGATCAAGCACTCAAATTCCTCCGACCATTACAGAATCTGGCGTCAAGTAGAATAGAAACCCATCTGTTGGCATATGAAGTATTCAGCAGAAAAGGCAAACTTCTGCTGATGTTACAATCTGTTAAACGTGCGCACGCCATAGATGCAAACCATTTTTTTCTCCATGAACACTTAGTAAAGCTCGCTGTTAAAGTGTCTGAGTCGAAGCACATGAAGGAGCCCGTGGCAATTGTAATAGAACGAGAACTCAAAACTCTTCTTAACGGAAACGATATCAAACAATTTAATGCTGATTTCTTGGAAAAACACTCTCATTCCTTGCTTCACAGATTTTCAGGTTTTTTTATGCTATGTCTTTTGGATGCTTCAAAAGTAGACGATGCGCTGGCGCTGGTTACAGACTTATCCGATAGTCTAGAAGACAGGACATTAGAGACCTGCACAATGATTTACAACGCACTTTTAGAGGGTACGCGAAGAACAACACCACAAACAATGTTCAGCACCGATGGCGGAAAAAGCGATCCAGTGCGGCTATTCAAGCTTTGGTTGTCCAAGCGACCCGAAGGAATGAAGAACACAGGGCCACTCTATCTAAGCATCATAAATCGTCCTAAATCAGCAGATGTTTGGTATACCAAAGTTCGAATGGGACAAAACACCATCGGCAATTTAATGAAATCCATGGCCTCCTGTCTCAGGACGAATAAGAAGCTGACGAACCACAGCATGAGGAAAACATTGGTATCAAAACTGAAGAAATCAGGTCAACCGCGCAATATCATCTGTGAAATAACAGGCCATGCACGTGAATCTTCGTTAGACGACTACGATGAAATAGACGAGAATCACAGGAAAGAACTGTCTCACATTATCAGTGGATATAAAGACGTGTCAAACGAAAATCAAGCAAACGAAGTCTCCCGCCAAAACACTGCAAATCAAGCCTCAAATCAAGAGATTGCAGTCCAACATAAACGAACACCTCTGGTTCCTATTTATCACGTCCAACAACAAGGCCAAATGTATCAGGCCATGGGTTCCAATCCTGGTTTTCAGCCAGCTGAATTTTCAGGATTTCAACCACGTTTTCCATTGCTGTCTCCGCAGTACCGCATGGAAGCCCTCAGTTGTGCTGCTCCCGTTCCATCGCAGAATTACACAGTCTGCACCTTCAATTTCTTCTCCAGAGACAGCCAGAATTCTCCACCCCAACCACAGAAGAAACGAAGGGTTTACATCATTGAGTCAGACGACGAGGATTGA

Transcript

rna-Spis20790_mrna

ATGGTGCTCAGAGAGGCTGGAAGACCTCAGAAGGCTTTGGATCAGTTGACAGCACATGAATCACTGATGCACGATAAACTTGTGGTGCGAGAAATAAAAGGGTCTCTGTTCCTTGAATTAAAGCAGTTCAGGGAAGCAGAGAGAATTTACAAGGACTTACTAAGGAGAAATCCAGAGAATAAGCATTATTACCAAGAACTGGAAAAAGCCATGCAGTTAGaGAACCCAGATGACCGATACAACCTGTACATGAAGTACTCTGAGTCATATCCAAGAGCACAGGCTCCAAAGAGAATCCCCCTTTCTTTTACATCAGgaGAAACTTTTGCTCGATTAATTGACAACTACATGCGACCAGCGATTCACAAGGGAGTGCCACCTTTGTTTAACAACATTAGGACTTTATACACTGAAAAGGACAAGgcctggaaagtcatgaaatttagGGAAAGGCAAGTTCCTTTAAGTTATATTTTTATTGAGATAGAGACAGagcttgaatttaatttatggatcactaacccttctgGTGGTGATCTTGAGCCTCCCACAGCAATCCTTTGGGTGTACCACTTCCTTGCCCAGCATTTTGATTATCTACGGGACAGCAAGAAGGCCATGGAGTACATTGACAAAGCTCTTGAGCATACTCCTACCCTTATTGAGGCATATATGGTCAAAGCCAGGAtttataagCATGGGGGAGACATGGAGAAGGCTGCACATTGTATGGATGAAGCAAGATCTCTTGACACTGCTGACAGATATGTCAATTGTAAATGTGCCAAGTACCAACTACGAGCCAATCAGGTTCAAAAAGCTGAGGAAACATGTGGATTGTTCACTAGGGAAGGAGTTGGTGCTGCCGAAAACCTGAATGAAATGCAGTGTATGTGGTTCCAAACTGAGAGTGGTTATGCTCTGCAAAGACAGGGCAAGCTGGGAGAAGCTCTGAAGAAGGCCCATGAGATTGAGAgacattttgatgaaataacAGAAGATCAGTTTGATTTTCATACCTACTGTATGAGAAAAATGACTCTTAGAGCTTATGTGAGACTGCTGCGACTTGAGGACGTTCTTCGAAGCCACagattttatttcaaagctGCTAAAATGGCAATAGAGTGTTATGTTCGGCTCCATGACAAGCCTATGACTGCAAACGACGAAGATGCTGAAGCAGGGTCCAGCGAGCTGTCAGCTAAAGATTTGAAGAAACTACGTAGTAAACAAAGAAGAGCAGAGAAAAAAGCCCAGGAAAGCAAGAAGGATCAAGCACTCAAATTCCTCCGACCATTACAGAATCTGGCGTCAAGTAGAATAGAAACCCATCTGTTGGCATATGAAGTATTCAGCAGAAAAGGCAAACTTCTGCTGATGTTACAATCTGTTAAACGTGCGCACGCCATAGATGCAAACCATTTTTTTCTCCATGAACACTTAGTAAAGCTCGCTGTTAAAGtgTCTGAGTCGAAGCACATGAAGGAGCCCGTGGCAATTGTAATAGAACGAGAACTCAAAACTCTTCTTAACGGAAACGATATCAAACAATTTAATGCTGATTTCTTGGAAAAACACTCTCATTCCTTGCTTCACAGATTTTCaggtttttttaTGCTATGTCTTTTGGATGCTTCAAAAGTAGACGATGCGCTGGCGCTGGTTACAGACTTATCCGATAGTCTAGAAGACAGGACATTAGAGACCTGCACAATGATTTACAACGCACTTTTAGAGGGTACGCGAAGAACAACACCACAAACAATGTTCAGCACCGATGGCGGAAAAAGCGATCCAGTGCGGCTATTCAAGCTTTGGTTGTCCAAGCGACCCGAAGGAATGAAGAACACAGGGCCACTCTATCTAAGCATCATAAATCGTCCTAAATCAGCAGATGTTTGGTATACCAAAGTTCGAATGGGACAAAACACCATCGGCAATTTAATGAAATCCATGGCCTCCTGTCTCAGGACGAATAAGAAGCTGACGAACCACAGCATGAGGAAAACATTGGtatcaaaactgaagaaatcagGTCAACCGCGCAATATCATCTGTGAAATAACAGGCCATGCACGTGAATCTTCGTTAGACGACTACGATGAAATAGACGAGAATCACAGGAAAGAACTGTCTCACATTATCAGTGGATATAAAGACGTGTCAAACGAAAATCAAGCAAACGAAGTCTCCCGCCAAAACACTGCAAATCAAGCCTCAAATCAAGAGATTGCAGTCCAACATAAACGAACACCTCTGGTTCCTATTTATCACGTCCAACAACAAGGCCAAATGTATCAGGCCATGGGTTCCAATCCTGGTTTTCAGCCAGCTGAATTTTCAGGATTTCAACCACGTTTTCCATTGCTGTCTCCGCAGTACCGCATGGAAGCCCTCAGTTGTGCTGCTCCCGTTCCATCGCAGAATTACACAGTCTGCACCTTCAATTTCTTCTCCAGAGACAGCCAGAATTCTCCACCCCAACCACAGAAGAAACGAAGGGTTTACATCATTGAGTCAGACGACGAGGATTGAACTTTAACGCTTCACTATTTTTCTGAGTTATTGATGacttctctttctt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12569 all species →	NatA_aux_su	N-terminal acetyltransferase A, auxiliary subunit	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013762 all species →	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR011010 all species →	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR021183 all species →	Family	N-terminal acetyltransferase A, auxiliary subunit	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22767 all species →	N-TERMINAL ACETYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017196 all species →	Biological Process	N-terminal peptidyl-methionine acetylation	Interproscan
GO:0031415 all species →	Cellular Component	NatA complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX15011.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.