Genomic Location: Spis.scaffold696:47842...74681
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families
| CDS |
| dus3l |
| Transcript |
| rna-Spis20776_mrna |
| Protein |
| PFX15024.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 adaptor Cullin RING|BTB · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08005 all species → | PHR | PHR domain | Domain | Interproscan |
| PF00651 all species → | BTB | BTB/POZ domain | Domain | Interproscan |
| PF18044 all species → | zf-CCCH_4 | CCCH-type zinc finger | Domain | Interproscan |
| PF07707 all species → | BACK | BTB And C-terminal Kelch | Domain | Interproscan |
| PF01207 all species → | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| PF21772 all species → | CATIP_N | Ciliogenesis-associated TTC17-interacting protein, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038648 all species → | Homologous_superfamily | PHR domain superfamily | Interproscan |
| IPR012983 all species → | Domain | PHR | Interproscan |
| IPR000210 all species → | Domain | BTB/POZ domain | Interproscan |
| IPR013785 all species → | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR018517 all species → | Conserved_site | tRNA-dihydrouridine synthase, conserved site | Interproscan |
| IPR035587 all species → | Domain | DUS-like, FMN-binding domain | Interproscan |
| IPR041367 all species → | Domain | E3 ligase, CCCH-type zinc finger | Interproscan |
| IPR011705 all species → | Domain | BTB/Kelch-associated | Interproscan |
| IPR000571 all species → | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR047501 all species → | Domain | Ciliogenesis-associated TTC17-interacting protein, dimerization/docking domain | Interproscan |
| IPR011333 all species → | Homologous_superfamily | SKP1/BTB/POZ domain superfamily | Interproscan |
| IPR048777 all species → | Domain | Ciliogenesis-associated TTC17-interacting protein, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45846 all species → | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0017150 all species → | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0008033 all species → | Biological Process | tRNA processing | Interproscan |
| GO:0050660 all species → | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
PFX15024.1.
