Gene detail

Detailed information of PFX16193.1 in Stylophora pistillata

Genomic Location: Spis.scaffold566:156350...161855
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00341 all species →	PDGF	PDGF/VEGF domain	Domain	Interproscan
PF03128 all species →	CXCXC	CXCXC repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000072 all species →	Domain	PDGF/VEGF domain	Interproscan
IPR004153 all species →	Repeat	CXCXC repeat	Interproscan
IPR029034 all species →	Homologous_superfamily	Cystine-knot cytokine	Interproscan

PANTHER

No PANTHER signature was detected for PFX16193.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0008083 all species →	Molecular Function	growth factor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05449	VEGFC_D; vascular endothelial growth factor C/D	-	Cytokines and neuropeptides	ko04052	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.