Detailed information of PFX16223.1 in Stylophora pistillata

Genomic Location: Spis.scaffold564:22292...93604
NR annotation: no NCBI-NR hit recorded
Species abbreviation SPIST · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17865
all species →		AAA_lid_5Midasin AAA lid domainDomainInterproscan
PF17867
all species →		AAA_lid_7Midasin AAA lid domainDomainInterproscan
PF21108
all species →		MDN1_4thMidasin AAA+ ATPase lid domainDomainInterproscan
PF12775
all species →		AAA_7P-loop containing dynein motor regionDomainInterproscan
PF07728
all species →		AAA_5AAA domain (dynein-related subfamily)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041190
all species →		DomainMidasin AAA lid domain 5Interproscan
IPR002035
all species →		Domainvon Willebrand factor, type AInterproscan
IPR040848
all species →		DomainMidasin, AAA lid domain 7Interproscan
IPR048617
all species →		DomainMidasin, lid domain 4Interproscan
IPR012099
all species →		FamilyMidasinInterproscan
IPR036465
all species →		Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR011704
all species →		DomainATPase, dynein-related, AAA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48103
all species →		MIDASIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0000055
all species →		Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0030687
all species →		Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14572MDN1, REA1; midasin-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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