Gene detail

Detailed information of PFX16491.1 in Stylophora pistillata

Genomic Location: Spis.scaffold542:60003...67334
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis19231_mrna

GGCAAACTTCTCTTTTTAACACGGAAGACTCTGGAGCTGTGATAGAGCTTGATTCTGGAAAACGCTATTACTACCGATTTGCTCAATCACGTGGCTACGCTATCCGCGAAACCAAGTGTTTTCGGCGTGATCGCTGAATTCTGCTTCAAGAACGGACGCGTCGCACATTCCATCAATGTGTGTTAGACTTTGCGACATTTTATCTCTTGACGCTCAGGTTTAGCTTTGGAAAATCGATAATTTAGGATCGGAGGACATAGTTTTTATCCTGTGAGGTGGCGAGTGTAGGATTATTTCTACTATTCTGTCCTCAGGCGCTTGAAATTGTGTAATCAAAATATCTTCAAGAAGCCATGTCAGGATATTGCGGAATGTCTTTACCGGCGCCAAGTATTCCAACACCTCGAGGCTTAGAAGCAATCTACTCCACTCTAAGACAAATCTATCCTGATCAACCAAATCCACTACAAGTTACTGCCCTGATAAAATACTGGCTTGGTGGTCCTGATCCCCTGGATTTCATCAGCATGTTTAACAATCCTGGTAGCCCAATGGAGGGGATTCCCTCACACTGGCACTATATCTCAGCCGGGCTATCTGATCTCCATGGTGATGGACGTGTTCATGAAGTCAAAAGGCGGGAGAGTCCAAGTGGGTTTGGTTTTGAGCTCACCTTTCGTCTGAAGAAGCAAGTTGGAGAGACATCACCACCCAGCTGGCCAGCAGAATTGCTCCAGTCACTTGCACGCTATGTGTTTCAGACAGacaATATGCTAGTGAGTGGAGACCATGTTTCCTGGCATCTCCCATTAGACCAGACACCCTCTGCCGCTGGACAATATAACTGTAACCCATCCCATATACAACACATGTTGATGGTAGATGACCCTCGGATACCAGTTATTTCAGGTCCCTTGGGATCAGTTCGTTTCATTCAGGTAGTTGGAATTTGCACAGAGGAACTGCAAGCTGCTCAACATTGGAATGGCATTGCTGTGTTGGATCTTTTGAAACAAGTACCTCCagcTGGTGGACCTTGGCTTGTGACTGACATGGACAGGATAGAAtcaatttttgtaattaaaCCCTCCTTGCAGgaaacagTCACAAATGGAATTGAGAAAGAGGGTTCCAATCTAAGTGGTGTCAGTGCTAAATGCTGGTGGGAGGaaagctttgtaaacaattctaCCAGCCAGCAAGCAAGTTTTCCTTATGGATCATCACATGATACCCAGACTGGGAAGGATTTGACCACACGTTTCCCTGTCTTACCACCAATACGCACTGGGTCTTCCTTTACATCAAACAGGGCCACAGATGGTGTGACAACTGAAGGACGCTCTGCTTGTAGTAGTGTCGTCAGTGAAATTTCTCGTACACGAACTCTGCGAGGTATTCATCTTCGGTTTGGTTTGGAGGCCGCCATGCTGTTACCACTAGCTCTGAGGGGTCGGCTCAATCATGGACGACACTTCACATTCCATAGTTCAGTGAATGACATGGCTGTCACATTTCTTAGTTCTAATGTAACTGGGTCCATTGCTGATAATGAGCACAGGTTTGCTGCATGCGGAACTTGGCTTCAGGTTCTGATAACTGAGGACTTCCTACAAACACTTGACAGAGACCTGGATGTTTTGACAAGGCCCAACGAGCTTGTCCTTCCAAGAGAATATCGCTGGCCAAGATATGGAATGATCATTTCTGTCCTTCCAGATAGTAACTAGCCAGAAAGCCATCAAAACACCTTGGAACAGGTGGTTAACTCTGACATTGTTTGACTGAGCTGAGAAAAGCTGCCAGAGGAACCTCACTCCTCTTGGGCCTGGACACGAGTGGACAATGCTGATACACAGTGTTTTTCCCCATGAGATGCTGCTGACTTAAAATTGTCTGTTagttttttgtcaatttttttctttttaatttctctttgcgATAGGAAAATaccacacacacaaacaaaacaacagaaaatgcTACATACACAAACCAAAAACAGCCTAATATCCAGAACCCTTAGCTAGGCCCATTGTGTACAGCATAATATACAGAAAAATGAACATTCTCCCCAAATATGAAAATTCTTTCTGACAAAGGTTAAGAAGAATATAAATTGTGGTATAATAGTAATGAGGAAAGGTGTAGAAAAATCGAAAATGTACGATCACCAACCTTTTGATGAAATCCTTCATGCAGTCTTGCAGagttgtttgaaatatttttaaaatcaggGCATTCCCACAGAGTGATGATGGGGCCATCAAACTTCCTGAATGCTACCATGTTTGTAAATTGACATGTTTTTACTAACTTAATTATGATACCTGAAGAGGCACTTGTTTGTGTGATGACTTTTAAAATACCGAGAGCCTATCAGTCTGAAGTAAGAGCATATAAGCAAAGGAGTGCCACCTTGTCTTTAAACCTTTCACTGAGTATTTTCACGAGTTGTGCAGTACTTTGAAGAGCCCACAAGGCCAGACAAATACAAAGAGTTTTACAAGCATTATGaaattttccttcattcttcCTCTGTGAATTACAATTTAAGGTTCAAAGGCTCCAagacaacaaataaacaaaaaatgaagAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12470 all species →	SUFU_C	Suppressor of Fused Gli/Ci N terminal binding domain	Family	Interproscan
PF05076 all species →	SUFU	Suppressor of fused protein (SUFU)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037181 all species →	Homologous_superfamily	Suppressor of fused, N-terminal	Interproscan
IPR016591 all species →	Family	Suppressor of fused, eukaryotic	Interproscan
IPR024314 all species →	Domain	Suppressor of fused C-terminal	Interproscan
IPR020941 all species →	Domain	Suppressor of fused-like domain	Interproscan
IPR038489 all species →	Homologous_superfamily	Suppressor of fused, C-terminal domain superfamily	Interproscan
IPR007768 all species →	Family	Suppressor of fused	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10928 all species →	SUPPRESSOR OF FUSED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0042994 all species →	Biological Process	cytoplasmic sequestering of transcription factor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06229	SUFU; suppressor of fused	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.