Gene detail

Detailed information of PFX16548.1 in Stylophora pistillata

Genomic Location: Spis.scaffold537:47394...61821
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03847 all species →	TFIID_20kDa	Transcription initiation factor TFIID subunit A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003228 all species →	Domain	Transcription initiation factor TFIID subunit 12 domain	Interproscan
IPR037794 all species →	Family	Transcription initiation factor TFIID subunit 12	Interproscan
IPR009072 all species →	Homologous_superfamily	Histone-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12264 all species →	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0000124 all species →	Cellular Component	SAGA complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan
GO:0051123 all species →	Biological Process	RNA polymerase II preinitiation complex assembly	Interproscan
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX16548.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.