Gene detail

Detailed information of PFX17492.1 in Stylophora pistillata

Genomic Location: Spis.scaffold469:145815...162149
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis18174_mrna

GATAGTTGGCTCGCTTGAACAACTTAACAAAAGTTGCTCGAAACTTTTTTAACACCACAACAGCCGCAATAGCCGACTGAAGCTCACAAGACTATCATTTACTCTCATTAGAGCGTGATTGACAATAATTCCAGTTTaaggaaacaaatacaaaaagaCTGTTTGCTTTGACGCCGTGAATGATCTGAATTACACAAAGAAGCCGGCCAGGACGTCACAATGTTTAAACAAGTTCGCTCCCGTTTGAGTCTTTCGCACAAAGAGCCGCTGGAAATCGTGTTTGACCCTCCTAGCCAATTCACGGATTTGAATGGGGCTGCAATGGACTACCAGCACAATCTTCCAAGACCACAGGAGCAACCGGTGTTTTCGACACGGGCCCATGTCTTCCAGATTGATCCTGCAACGAAAAAAAGCTGGCTACCCTGCTCCAAACAGGCGGTAACTGTATCATTTTATTATGATCCTAACCAAGGAACACACCGCATCATATCTGTCGATGGCACAAAGGTAATTATCAACAGTACTGTATTACCAAACATGACATTCACCAAGACATCACAGAAGTTTGGCCAGTGGTCAGATCCCAGGGCAAACACTGTATTTGGTTTAGGATTTCCATCAGAAGCTGAACTCAACAAGTTTGCAGAGAAGTTCAAAGAAGCTAAGGGTGGCTCAAAAGCAGCTGTGGGCAACAACAATGGTAACTCCAATTCATCTCCAGCACCTGTCAATGCAGTTACTACTAATGGCACATCAAGTGGGTCCGTAAATGGAACAGCAGAGTCCCCTCACAGCACACCTGGTGTTGGTCACAAATCACCATCAGTAAAAAGTAACTCATCTGCCAGCAGTGGTGAGgATGAATCAAAAGAATCAGCTGGGATCAGTCATAAACCGATTGGAAACACCGAATCTCATTTGAAGTATGAGAATGATCGATTGAAGATGGCTCTAGCTCAAAGTTCAGCCAATGCTAAAAAATGGGAGGCAGAGCTGACAACATTGAAGAATAATAATGCAAGGTTAACAGCAGCCCTACAGGAAAGCACAGCTAACGTTGAAGAGTGGAAGAAGCAGCTTAATGCCTACAAGGAGGAAAATGGTAAACTCAGGAAAAAGGTCCATGAATTAGAATCTTCAGACCAACTAAGTGAGAAATATAATTCCCTGACGCAAGAGAAACTCACCCTGGATGGCCGTGTAATTCAGCTTGAGAGCATGATCAGACAGAAGGATGAGGACATCACCTCTTTGAGACAAGCAAAGGCAGAACTCACAAACCAGAACCAGaCATTACAACTTGATAATGAAAGACTGCAGTTAAAAACAGAAGAGATGAGCTTGCACATGAATGAGACAGCTTTAAATGAAACACGTGTGAAAGAGTTGACTGAATTGCAACAAGAGCTTGCTAACAAAGTTGAGGAGATGAGTGCACTCAGTACACGACTAGCAACAAGCTTGGAGATGGCGCCCCCTTTAACAGAAAGTTGAATCTTTGTAAAGTGAATTTCCAGCCTTTTACAACTTTAGCTATCAGCTGCAGAAcaacaaattaatttatttataataatcAAATGATTAGTAGGTAATAAGCTGTTTAAATTGCTAAAGTGTGGTGTATAATGTGTTTAGTTAACCTAAGATAATTAGGCATGTGTGGTCTTAAAATTTGGTGGGCATTATGTAAACAATGCGACTTATATGCAAATTCCATACTATGCAGCCTGGGAATTTTGTGTTGTGAAATTCTCATAGTTTAAGTCTTCTGCTGAATGTTTGATTCCTGTTACAAGAGGGCCAATATTATATCATTTATCAAGCCCTTTCATATTGTAGCAAAATTCACCTTGTTGTGGGGTATATTCTGTGAGGTTTCAgtaatttagaaaattttgaagCCATCATTTGAAGCATTTAGATTTATTACACTTTATACTCAACACAATGATTGTAAAGAAGCTTCAAAATGGCAGTAgattatttacttttttgttatcaatttctttttgttttttattgcaAGAGGGAAAAGTTTAAGTGAATTGAATTCTAATGTACAAAAATGTGTACATTAATACTGTAAGTAACAATAATATATTGCCTAATGGTGACATTTAAACGAGTGTGTGATTTCACTAGGGtcaaaacttaattaaaatgaTAACAAGAGAGAAGTTGTAAAAATGGTGAATATGAATACTTCAAATAAAATCGAGTAGCTGCTGATAGTAATGTTTAGCTTTGCACCATTACCCACAGTAAACAGTATGAACAAATATCTGACTGCAACATGGGATTGATTAATTACTTCATGCTCCTTGCCTTTTCATGGTTTGTTATTTAGAATTTAAAGGGGCTAGGACCCTCTATTTCAGGTACTTGTGAGTGAAAGGAAAGACAAAGGGTCCTTAAGTCCATAAAACAACTGCCGTAAATGGCAGCATGGGCAGAGTAGTTGCATATGCCTACAGCTGAGCCTGTTACCATGAACCTACCTGAATTGTCAGTGGACTAACTCCACTGCTAACAATCAAGGGTAGGGATTGGACGGTTACTTTAAATAGCCACAAATACAACCATCATGTAGTCTCTTCAACCTCTGTGGTCATTTGTATTGTAGGAAAGGGAATAGTGGAAGCTGAGAAATTGGTtgtaaaatacaaatttaaaaagaatgtcAGTTCAAGGCCAAGTTGTGTATAACTGGAGTAGCATTTCCGGGACTCAAAGTGACCAggagtatttccttttttttatagacgtttatt

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003713 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00568 all species →	WH1	WH1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000697 all species →	Domain	WH1/EVH1 domain	Interproscan
IPR044100 all species →	Domain	Homer, EVH1 domain	Interproscan
IPR045027 all species →	Family	Homer family	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10918 all species →	HOMER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007216 all species →	Biological Process	G protein-coupled glutamate receptor signaling pathway	Interproscan
GO:0035256 all species →	Molecular Function	G protein-coupled glutamate receptor binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:2001256 all species →	Biological Process	regulation of store-operated calcium entry	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15010	HOMER; homer	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.