Gene detail

Detailed information of PFX17664.1 in Stylophora pistillata

Genomic Location: Spis.scaffold457:20...35500
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ACSM3

ATGGATGTCCTCCCCTGGGGTGGGATGGGTGGGGTATTGCGAAGACCATTGCTCTTCACCCAGTATCACCCAGTATGTGGCAGCCAGGCACAAGTCGGCATATATAAGGTCGAAGACCTTAGATATCTTTCAAGCCATTTATCTGGGTTGCAAGGAACTAATGATCAAATTGGGAAACGTAATCGAGAAGGAGACTCCTACTTTTCTACAGGTGACGACTCTGACCCACATACCTGCAGAAAACTTGGAGAATGCGAGGGCACTTCAGGGAGGTCTCAACAGTGCTGGGGATATGAACCAGGGTGTAACTCACCAGATAAATGGTACATTAAACCACAGTGCTATGACAACCTGTCTGGCAGACATTTTAGAACGATTGAGGACAAAATTTACCATTTCTGGAAAGAGAGTGATTTTGGTTTTGTGAAATCTGTTCAGGACAGTTTACAGTTGGTTTGTAAGCCAAAGGAATACCAGGCAGATGGCTCATCTCTTGTATGCTCCAAACAGCTGACATACTGCAAAGCAAAGCATCTATTCATGGATTTCAGAAGTATGCCAAATGGACAAAGCACATCAAAGTCAGACAAATTGAAGCCTCAGAAAATTGGTGGGTTTTGTGAAGTGGATGCTAGTGCCCTCAGTGAAGAAGGAAAGTACAGAATGGAGCTCAGTTCTTGGTTAAATGAAGTAGAGGATTTTTCGTCCTTGCCCTTCAAACCAAATCAGGAGGAATACTGTGATGTCTTGGTGGAGAAACCTACTTTCTTCATGAAATTAGATGCAGTTGTAAACATGTACCATCATTTCTGCGACTTTTTCAACTTGTACCTCACTCAACATGTAAATGGATCCTTTGACACTGATGTTAATATTGTACTGTGGGAAAAGCATGCAAGACGAAGTTTGGGGAACTTTGGAGTAACATGGAAAGTGTTTACATCACACCCTGTCCTCTATCTTGGAAAGGAATATGAAAACAAGAGGGTGTGTTTTAAAGAAGCCATCTTTGCCCTTCTGCCAAGAATGGTGTTTGGACTGTACTACAACACACCTCTGACTCCAGGTTGTTCTAAAAGTGGTCTTTTCAAAGCATTTTCTGAACATGTCATGGGAAGACTTGGCATCATCCAGGAGCGGAACTTGCAGAACAGCAGTGAACCAATTCGTATAACATTGCTATCCAGAGGGACAAAGTTTAGAAAAATCTTGAATGAGAATGAGATTACTCATGCTTTGGATACATACCCTGGAGTGAAGCTGAATGTTTCAAAATATTCTTGGGATATCCCTTTCATTGAACAACTAAAACGGAGCCACAACACAGATCTATTTATTGGAATGCACGGTGCTGGTCTTTCTCACGCCCTTTTTCTCCCGGACTGGGCTAATCTCTTTGAGCTGGGAGTCTCTTATACCACTTGGGAAAACGAGGACAAAGTTGTTGAGCATACTGAGGAACTACATCCGCAATACAGTGATCATCCCAAGTTTAGGAACTACGCGTTTGATGTGCGTGAATTTATGAGGCTAGTGGAACGGACAGTTAAAAAATCCAACTCGGCCATCACCTTGGTGGCGAACGAAATGCGGCTAGTTTATTTAGCCTCAGCGCTTAGATTTCGTTACCAGTTAGGAAGATCATCTAGGATACACCGTGGATCAGTTGCAGCAATTAAATGCATCTTTTCGCGGTGGAATTCTGGACATGTTCACTCAACAACACCACCAGTATTCGATTCCAAAGTTGGATTCACCGACTACGAGAAGGAGCGGAGAGAATTTCACATCAGGGTTCCAGAGTACTTCAACTTTGCCAATGTTCTTGATGATTGGGCGCAAAAGGAAAAGGCATTAGTCTCAAACCAGACTGGAGAACGGACAGAAAAGAATCCGGCCTTCTGGTGGGTCGATGATAAAGGAAAACAAATAAAATGGTCATTCCAGCAACTTACCGAAAACAGCAGAAGGACTGCAAATGTTCTAGCGGGTGCATGTGAAGTTCAGAGGGGAGACCGTGTCATGGTCATTTTGCCGAGACTTCCAGAATGGTGGCTCATTAACATCGCTTGCCTGAGGACAGGAAATGTAATCAGTCCCGGATCGACTCAGTTACGAGCTAAAGACATCGAGTCACGGCTGCTTACCTCTAAAGCGACTTGCATCATTGCAGACCCGGAAAGTGCTATGTTTGTTGATGAGGTTGCCAATTGTTCACCATATTTGAAATCAAAGTTACTGGTGAAAGAAGATGAAAAGAGTCCAGACAAGAGAGGTTGGCTTCCTTTCCAAGAACTATACGCACAGGCCTCGAATGAGCATAAATGCGAAGAAACACTGAGCAGCGAACCAATGACATTGTTTTTCACAAGTGGAACGACAGGACTCCCAAAGATGGCAGAGCACACGCATGCTAGTAGTGGGTTGGGGCACGCTATTACTGGAAAATATTGGTTGGACAACATTCCTGAGGATGTCCATTGGAACCTTTCTGACACGGGCTGGGCTAAATCTGCTTACAGCAGCGTTTTTGGCCCATGGTCTCAAGGCGCCTGCGTATTCGTATACCATAAGGCACGTTTTGAGCCCGTAGCTATATTAGATGCGCTTCAAAAGTATCCAATCAGCACGTTTTGCTCGGCCCCCACTGTATATCGAATGATGATCCAAGAGGACCTTAGCAAATACAAGTTTCCGTCACTGAGGCATTGTTTAAGCGCAGGAGAGCCTTTAAATCCTGAGGTCGTAACTGAGTGGCGAGAGCAGACTGGGCTGGAGATAAGAGAAGGATATGGTCAAACTGAAACTACCTTGCTGTGCGGCACCTTTCGTTGTCTCGAAAATCGGCCAGGATCCATGGGTAAACCTGCTCCAGGATACAACTTGACGATTGTGGATGAAAAAGGGAATGAATGCCCAGATGGAGTGGAAGGTGAAGTTGTTGTGGAACTCTCACCAAACAGACCCATAGGACTTTTTACTCGCTATGTGGATGATCCGGATCGAACAAATGCTGTGTTCCACGACAATTTCTATTGGACTGGTGATAAAGCTTACAAAGACAAAGATGGATACTTTTATTTCGTTGGTCGATCTGATGACGTCATACTCTCAGCGGGCTATCGAATAGGTCCATTTGAGGTTGAAAACGCCTTGATAGAACACCAAGCAGTCGCAGAGGCAGCGGTTGTTAGTAGTCCCGATACCCTAAGGGGGGAGATCGTGAAAGCTTTTGTTATTCTCTCGCCTCGTTTTACTGGAGACAAGGAATCATTGGTCAAAGAATTACAAGACCATGTGAAAGAAATAACAGCACCCTACAAGTATCCGAGAAAGATTGAGTTTGTGGAGAACTTACCCAAAACAGTCAGTGGCAAGATTAGAAGAGTAGAACTGAGACAGAAGGAATGGTCTTAA

Transcript

rna-Spis17991_mrna

atggatgtcctcccctggggtgggatgggtggggtaTTGCGAAGaccattgcTCTTCACCCAGTATCACCCAGTATGTGGCAGCCAGGCACAAGTCGGCATATATAAGGTCGAAGACCTTAGATATCTTTCAAGCCATTTATCTGGGTTGCAAGGAACTAATGATCAAATTGGGAAACGTAATCGAGAAGGAGACTCCTACTTTTCTACAGGTGACGACTCTGACCCACATACCTGCAGAAAACTTGGAGAATGCGAGGGCACTTCAGGGAGGTCTCAACAGTGCTGGGGATATGAACCAGGGTGTAACTCACCAGATAAATGGTACATTAAACCACAGTGCTATGACAACCTGTCTGGCAGACATTTTAGAACGATTGAGGacaaaatttaccatttctgGAAAGAGAGTGATTTTGGTTTTGTGAAATCTGTTCAGGACAGTTTACAGTTGGTTTGTAAGCCAAAGGAATACCAGGCAGATGGCTCATCTCTTGTATGCTCCAAACAGCTGACATACTGCAAAGCAAAGCATCTATTCATGGATTTCAGAAGTATGCCAAATGGACAAAGCACATCAAAGTCAGACAAATTGAAGCCTCAGAAAATTGGTGGGTTTTGTGAAGTGGATGCTAGTGCCCTCAGTGAAGAAGGAAAGTACAGAATGGAGCTCAGTTCTTGgttaAATGAAGTAGAGGATTTTTCGTCCTTGCCCTTCAAACCAAATCAGGAGGAATACTGTGATGTCTTGGTGGAGAAACCTACTTTCTTCATGAAATTAGATGcagTTGTAAACATGTACCATCATTTCTGCGACTTTTTCAACTTGTACCTCACTCAACATGTAAATGGATCCTTTGACACTGATGTTAATATTGTACTGTGGGAAAAGcaTGCAAGACGAAGTTTGGGGAACTTTGGAGTAACATGGAAAGTGTTTACATCACACCCTGTCCTCTATCTTGGAAAGGAATATGAAAACAAgaggGTGTGTTTTAAAGAAGCCATCTTTGCCCTTCTGCCAAGAATGGTGTTTGGACTGTACTACAACACACCTCtgACTCCAGGTTGTTCTAAAAGTGGTCTTTTCAAAGCATTTTCTGAACATGTCATGGGAAGACTTGGCATCATCCAGGAGCGGAACTTGCAGAACAGCAGTGAACCAATTCGTATAACATTGCTATCCAGAGGGACAAAGTTTAGAAAAATCTTGAATGAGAATGAgattACTCATGCTTTGGATACATACCCTGGAGTGAAGCtgaatgtttcaaaatattcttggGATATCCCTTTCATTGAACAACTAAAACGGAGCCACAACACAGATCTATTTATTGGAATGCACGGTGCTGGTCTTTCTCACGCCCTTTTTCTCCCGGACTGGGCTAATCTCTTTGAGCTgggAGTCTCTTATACCACTTGGGAAAACGAGGACAAAGTTGTTGAGCATACTGAGgaactACATCCGCAATACAGTGATCATCCCAAGTTTAGGAACTACGCGTTTGATGTGCGTGAATTTATGAGGCTAGTGGAACGGACAGTTAAAAAATCCAACTCGGCCATCACCTTGGTGGCGAACGAAATGCGGCTAGTTTATTTAGCCTCAGCGCTTAGATTTCGTTACCAGTTAGGAAGATCATCTAGGATACACCGTGGATCAGTTGCAGCAATTAAATGCATCTTTTCGCGGTGGAATTCTGGACATGTTCACTCAACAACACCACCAGTATTCGATTCCAAAGTTGGATTCACCGACTACGAGAAGGAGCGGAGAGAATTTCACATCAGGGTTCCAGAGTACTTCAACTTTGCCAATGTTCTTGATGATTGGGCGCAAAAGGAAAAGGCATTAGTCTCAAACCAGACTGGAGAACGGACAGAAAAGAATCCGGCCTTCTGGTGGGTCGAtgataaaggaaaacaaataaaatggtCATTCCAGCAACTTACCGAAAACAGCAGAAGGACTGCAAATGTTCTAGCGGGTGCATGTGAAGTTCAGAGGGGAGACCGTGTCATGGTCATTTTGCCGAGACTTCCAGAATGGTGGCTCATTAACATCGCTTGCCTGAGGACAGGAAATGTAATCAGTCCCGGATCGACTCAGTTACGAGCTAAAGACATCGAGTCACGGCTGCTTACCTCTAAAGCGACTTGCATCATTGCAGACCCGGAAAGTGCTATGTTTGTTGATGAGGTTGCCAATTGTTCACCATATTTGAAATCAAAGTTACTGGTGAAAGAAGATGAAAAGAGTCCAGACAAGAGAGGTTGGCTTCCTTTCCAAGAACTATACGCACAGGCCTCGAATGAGCATAAATGCGAAGAAACACTGAGCAGCGAACCAATGACATTGTTTTTCACAAGTGGAACGACAGGACTCCCAAAGATGGCAGAGCACACGCATGCTAGTAGTGGGTTGGGGCACGCTATTACTGGAAAATATTGGTTGGACAACATTCCTGAGGATGTCCATTGGAACCTTTCTGACACGGGCTGGGCTAAATCTGCTTACAGCAGCGTTTTTGGCCCATGGTCTCAAGGCGCCTGCGTATTCGTATACCATAAGGCACGTTTTGAGCCCGTAGCTATATTAGATGCGCTTCAAAAGTATCCAATCAGCACGTTTTGCTCGGCCCCCACTGTATATCGAATGATGATCCAAGAGGACCTTAGCAAATACAAGTTTCCGTCACTGAGGCATTGTTTAAGCGCAGGAGAGCCTTTAAATCCTGAGGTCGTAACTGAGTGGCGAGAGCAGACTGGGCTGGAGATAAGAGAAGGATATGGTCAAACTGAAACTACCTTGCTGTGCGGCACCTTTCGTTGTCTCGAAAATCGGCCAGGATCCATGGGTAAACCTGCTCCAGGATACAACTTGACGATTGTGGATGAAAAAGGGAATGAATGCCCAGATGGAGTGGAAGGTGAAGTTGTTGTGGAACTCTCACCAAACAGACCCATAGGACTTTTTACTCGCTATGTGGATGATCCGGATCGAACAAATGCTGTGTTCCACGACAATTTCTATTGGACTGGTGATAAAGCTTACAAAGACAAAGATGGATACTTTTATTTCGTTGGTCGATCTGATGACGTCATACTCTCAGCGGGcTATCGAATAGGTCCATTTGAGGTTGAAAACGCCTTGATAGAACACCAAGCAGTCGCAGAGGCAGCGGTTGTTAGTAGTCCCGATACCCTAAGGGGGGAGATCGTGAAAGCTTTTGTTATTCTCTCGCCTCGTTTTACTGGAGACAAGGAATCATTGGTCAAAGAATTACAAGACCATGTGAAAGAAATAACAGCACCCTACAAGTATCCGAGAAAGATTGAGTTTGTGGAGAACTTACCCAAAACAGTCAGTGGCAAGATTAGAAGAGTAGAACTGAGACAGAAGGAATGGTCTTAAATCAACCATAATTAAACCTTAACTCACAGTTTGTTACAATAGATATGTATATTATTGGCCTTCGTAAGCATATGTACACGACAAAACAATTTATCGCACAAATAGAATTATCAGGATGCATTGAATAAACTGGTAGCCATTAGGGAATAAAGTGTAGAATCTGAGAAAATCTTTCTTGTTATGTATGTGACGTTCAGTTATCAAACACCGTCAAGATTTTTGTGGGGCTGTTTTGAGATCTGTAGGCTTGACTTTGGCTTCAATATTTTGAAcagttttatgaaataaaataattgaaattaattaAAGCGTCGACGTTTGATGaaatttaattacttttactGTCAATTTGATTTCTTCAGATTGACTTCTTTTATCAACATTTTAcacttataaaataaatatattagtTATGATCATCAACTATCTTGGATTGAGGGACTAGGCTACCATATTTTCAGAACCGTAAGAAACCTTTTTCTAAGgtaaacaaacagaaaggaGAACGACTGATCCTTTCAGCGGTTTTTGGCTTTCATCGCCGTTCGTTTCAACCCAGTAGCTGCTTCAGTGTGACCATAACAGTGAAGAACTTGACtagaagaataaagaaaatgtttttttttcttctttttaaccaaaTGGAATGAAATAGAATGTCACGAAATAAACTTCTAAACTTTG

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001421 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan
PF04577 all species →	Glyco_transf_61	Glycosyltransferase 61	Family	Interproscan
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan
IPR049625 all species →	Domain	Glycosyltransferase 61, catalytic domain	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR051087 all species →	Family	Mitochondrial Acyl-CoA Synthetase Medium-Chain	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43605 all species →	ACYL-COENZYME A SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan
GO:0004321 all species →	Molecular Function	fatty-acyl-CoA synthase activity	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0006637 all species →	Biological Process	acyl-CoA metabolic process	Interproscan
GO:0015645 all species →	Molecular Function	fatty acid ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX17664.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.