Gene detail

Detailed information of PFX17715.1 in Stylophora pistillata

Genomic Location: Spis.scaffold453:200232...207310
NR annotation: no NCBI-NR hit recorded
Species Stylophora pistillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-Spis17950_mrna

atgaaattcaaatctCTTCAGGATTCATCACTATCCATAACCAGTCTCCTTTGGAACCTTTTAGACACGGTCGCAGAGGACTGGAATAAGCTGGAGACGAAATACCAGAAATCTGGTTTCAGGCAGGATCAAAACATGGCGGACAGTGGGGTGAAGAGTGATCTTTTGTCTGAAATACAGAATGCGTTTCTCAGCGAAAAACGAAATCTTGTAGTTCAAAACTTTGGAACTCAATATGATCTACTCGAAGTCTGTCTTGAGAGAAGTGTGGTCGAAAAAGTCAACCATGTCTACAAACACAAGgtGAATGAAGTTAAACCAGTAACAAACCAAAGGGCATCCGGACGATGCTGgatatttgcatttttgaaTGCAATTCGCCAAAAATTTGTGCAACACTTTAACTTGGAAGACTTTGAATTTAGCCAACAGTTTCTCTACTTCTGGGACAGAATTGAAAGGTCGTATTTTTTCATAAATACCTATGAAGAACTTGCTCGGAAAGGGGAAGAACCAGATGGACGTTTGATGATGTTTCTTCTGTCCAACCCTTTAAATGATGGTGGCCAGTGGGACATGCTTATCAACCTGGTAGAAAAATATGGCCTGGTGCCGAAGGCTGTGTGGCCTGAAACATTTACCTCTAATAGGTCCATGCGTTTGAGGCGGATAATGAATCACAAGCTGCGGGAATATGCTGTACAGCTTAAAGAACTGGTGGACAAGAAATGCAGTGAAGAGGAAATGAAAGAAGCcaagaagaaaatgatgacAGAGGTGTACCGTATAACAAGCATATGCCTTGGCACTCCACCCAAGACTTTTGAGTGGGAATATACAGACAAAAGTAAAAAGTATTTCCAGCTGTCAGGATTATCTCCACTTCAATTTTACAATGAGCATGTCAAACCAGTCTACAACCCTCTTGACAAGGTGTGCCTAGTGAATGATCCTCGCAATCCTTACAACAAACTGCTGACAGTAGAGTACCTCAGTAACATGGTGAATGGACTGTGCGTCCTTTACAACAATCAACCTGTGGAGGTTCTCAAGAAGTTGACAGCTGCATCTCTCAAGGACGATGAGGCAGTTTGGTTTGGATGTGATGTTGACAAACACTTTGAAAGAAAGATTGGAGCACTTGATATGGAAATtCATAACTATGATTGGGCATTTGGCATTTCcatgaaatatttaaacaaagcaCAGCGTTTGCTGTATGGTGGATCGCTCATGACCCATGCTATGGTGTTCACTGGATTTTCCTGGAAGGAAAACTCGAAAACCAGCGACACGGAAGATCATTCAAAACCGGTCGAGGAAGGTGGCACAGCGGACATAGAAACCATAAAATGGCGTGTGGAGAATTCCTGGGGTGATGAGAAGGACAAACCAGGTTATCTTATGATGACTGACACCTGGTACTCAGAATATGTCTATGAAGTTGTTATAGACAAGAAATATGTCCCTGCTGATGTGTTGGGTGTCCTGGAACAGCAGCCAATAGTGCTGCCTGCTTGGGATCCGATGGGGTCCCTGGCATGTGTTTTGTGTGACAATGGGGAACATATATCTCATTTGTAATGATTAGCGTGCTTGCTATTTATCGATTACTTTGTAATGCACGTTTTCACGATATCTAGCAACTATATATCTCACTTGTAACAATttggataataatgataataatcatctttattggggaaactttttcataacaaatatggttttcaaaaaggacctcgaaactagatatatatagtagaaacaaaaaagcaataacATTGCAAAGGGattaaaaagatacaaaaaaatgcataaaaaattaaaaataagtataaataaaaatgaaacgcaagtagctatattaaaaacttaaaaacattacgtTTAAAACTATTGACATTCTTTGAGTCTTTGATCGTCTGACTGAGGGAGTTAAAATCGGAAACGGCATAATATTGTGTTCTTTGCTTCCCCCAATTTCTTTTGACACG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03051 all species →	Peptidase_C1_2	Peptidase C1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004134 all species →	Family	Peptidase C1B, bleomycin hydrolase	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10363 all species →	BLEOMYCIN HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0070005 all species →	Molecular Function	cysteine-type aminopeptidase activity	Interproscan
GO:0004177 all species →	Molecular Function	aminopeptidase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0009636 all species →	Biological Process	response to toxic substance	Interproscan
GO:0043418 all species →	Biological Process	homocysteine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PFX17715.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.